Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sdc3Q64519 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.63□□□□□ -0.39
Sdc3Q64519 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sdc3Q64519 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sdc3Q64519 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sdc3Q64519 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.63□□□□□ -0.39
Sdc3Q64519 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sdc3Q64519 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sdc3Q64519 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sdc3Q64519 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sdc3Q64519 Gm13226-201ENSMUST00000117838 404 ntBASIC12.63□□□□□ -0.39
Sdc3Q64519 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.63□□□□□ -0.39
Sdc3Q64519 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.63□□□□□ -0.39
Sdc3Q64519 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sdc3Q64519 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sdc3Q64519 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.63□□□□□ -0.39
Sdc3Q64519 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Sdc3Q64519 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sdc3Q64519 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sdc3Q64519 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sdc3Q64519 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sdc3Q64519 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Sdc3Q64519 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sdc3Q64519 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.63□□□□□ -0.39
Sdc3Q64519 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sdc3Q64519 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sdc3Q64519 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.63□□□□□ -0.39
Sdc3Q64519 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Sdc3Q64519 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.63□□□□□ -0.39
Sdc3Q64519 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sdc3Q64519 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sdc3Q64519 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sdc3Q64519 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sdc3Q64519 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sdc3Q64519 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sdc3Q64519 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sdc3Q64519 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sdc3Q64519 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Sdc3Q64519 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sdc3Q64519 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.62□□□□□ -0.39
Sdc3Q64519 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sdc3Q64519 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Sdc3Q64519 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Sdc3Q64519 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sdc3Q64519 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sdc3Q64519 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sdc3Q64519 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sdc3Q64519 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sdc3Q64519 Gm12203-201ENSMUST00000118235 598 ntBASIC12.62□□□□□ -0.39
Sdc3Q64519 Gm5687-201ENSMUST00000118252 640 ntBASIC12.62□□□□□ -0.39
Sdc3Q64519 Gm13369-201ENSMUST00000119442 987 ntBASIC12.62□□□□□ -0.39
Sdc3Q64519 Gm12209-201ENSMUST00000120089 596 ntBASIC12.62□□□□□ -0.39
Sdc3Q64519 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sdc3Q64519 Gm27731-201ENSMUST00000185192 107 ntBASIC12.62□□□□□ -0.39
Sdc3Q64519 Gm40466-201ENSMUST00000212174 422 ntBASIC12.62□□□□□ -0.39
Sdc3Q64519 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.62□□□□□ -0.39
Sdc3Q64519 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sdc3Q64519 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.62□□□□□ -0.39
Sdc3Q64519 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sdc3Q64519 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.62□□□□□ -0.39
Sdc3Q64519 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.62□□□□□ -0.39
Sdc3Q64519 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sdc3Q64519 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sdc3Q64519 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.62□□□□□ -0.39
Sdc3Q64519 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sdc3Q64519 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sdc3Q64519 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sdc3Q64519 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sdc3Q64519 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sdc3Q64519 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Sdc3Q64519 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sdc3Q64519 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Sdc3Q64519 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sdc3Q64519 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sdc3Q64519 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sdc3Q64519 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sdc3Q64519 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sdc3Q64519 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sdc3Q64519 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sdc3Q64519 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.61□□□□□ -0.39
Sdc3Q64519 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sdc3Q64519 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sdc3Q64519 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Sdc3Q64519 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sdc3Q64519 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.61□□□□□ -0.39
Sdc3Q64519 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sdc3Q64519 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sdc3Q64519 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Sdc3Q64519 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Sdc3Q64519 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.61□□□□□ -0.39
Sdc3Q64519 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.61□□□□□ -0.39
Sdc3Q64519 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sdc3Q64519 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sdc3Q64519 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sdc3Q64519 Gm12957-201ENSMUST00000117835 377 ntBASIC12.61□□□□□ -0.39
Sdc3Q64519 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.61□□□□□ -0.39
Sdc3Q64519 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sdc3Q64519 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.61□□□□□ -0.39
Sdc3Q64519 Gm29127-201ENSMUST00000188304 517 ntBASIC12.61□□□□□ -0.39
Sdc3Q64519 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms