Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn1Q64347 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn1Q64347 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn1Q64347 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn1Q64347 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn1Q64347 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn1Q64347 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn1Q64347 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn1Q64347 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn1Q64347 Gm12502-201ENSMUST00000120197 444 ntBASIC16.59■□□□□ 0.25
Clcn1Q64347 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC16.59■□□□□ 0.25
Clcn1Q64347 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC16.59■□□□□ 0.25
Clcn1Q64347 Mir3547-201ENSMUST00000175461 88 ntBASIC16.59■□□□□ 0.25
Clcn1Q64347 Gm16505-201ENSMUST00000179981 232 ntBASIC16.59■□□□□ 0.25
Clcn1Q64347 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn1Q64347 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn1Q64347 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Clcn1Q64347 Gm37042-201ENSMUST00000193816 581 ntBASIC16.59■□□□□ 0.25
Clcn1Q64347 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn1Q64347 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC16.59■□□□□ 0.25
Clcn1Q64347 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn1Q64347 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC16.59■□□□□ 0.25
Clcn1Q64347 AC132260.2-201ENSMUST00000224482 344 ntBASIC16.59■□□□□ 0.25
Clcn1Q64347 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn1Q64347 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn1Q64347 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn1Q64347 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn1Q64347 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn1Q64347 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn1Q64347 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn1Q64347 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn1Q64347 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Clcn1Q64347 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn1Q64347 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn1Q64347 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC16.58■□□□□ 0.25
Clcn1Q64347 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.25
Clcn1Q64347 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Clcn1Q64347 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Clcn1Q64347 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
Clcn1Q64347 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Clcn1Q64347 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
Clcn1Q64347 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Clcn1Q64347 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clcn1Q64347 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC16.58■□□□□ 0.24
Clcn1Q64347 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clcn1Q64347 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC16.58■□□□□ 0.24
Clcn1Q64347 Gm12715-201ENSMUST00000121430 1128 ntBASIC16.58■□□□□ 0.24
Clcn1Q64347 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC16.58■□□□□ 0.24
Clcn1Q64347 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Clcn1Q64347 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC16.58■□□□□ 0.24
Clcn1Q64347 Gm24548-201ENSMUST00000158650 108 ntBASIC16.58■□□□□ 0.24
Clcn1Q64347 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC16.58■□□□□ 0.24
Clcn1Q64347 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clcn1Q64347 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC16.58■□□□□ 0.24
Clcn1Q64347 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Clcn1Q64347 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clcn1Q64347 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clcn1Q64347 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC16.58■□□□□ 0.24
Clcn1Q64347 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Clcn1Q64347 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clcn1Q64347 Gm15897-201ENSMUST00000117770 1486 ntBASIC16.58■□□□□ 0.24
Clcn1Q64347 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clcn1Q64347 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clcn1Q64347 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Clcn1Q64347 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC16.58■□□□□ 0.24
Clcn1Q64347 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Clcn1Q64347 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clcn1Q64347 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Clcn1Q64347 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clcn1Q64347 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Clcn1Q64347 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clcn1Q64347 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Clcn1Q64347 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clcn1Q64347 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clcn1Q64347 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clcn1Q64347 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clcn1Q64347 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Clcn1Q64347 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clcn1Q64347 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clcn1Q64347 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clcn1Q64347 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clcn1Q64347 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Clcn1Q64347 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC16.57■□□□□ 0.24
Clcn1Q64347 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clcn1Q64347 Gm37844-201ENSMUST00000192473 4097 ntBASIC16.57■□□□□ 0.24
Clcn1Q64347 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clcn1Q64347 Gm2606-201ENSMUST00000100754 1002 ntBASIC16.57■□□□□ 0.24
Clcn1Q64347 Gm11978-201ENSMUST00000122315 466 ntBASIC16.57■□□□□ 0.24
Clcn1Q64347 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Clcn1Q64347 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Clcn1Q64347 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC16.57■□□□□ 0.24
Clcn1Q64347 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Clcn1Q64347 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Clcn1Q64347 Gm7293-201ENSMUST00000216682 1007 ntBASIC16.57■□□□□ 0.24
Clcn1Q64347 Gm5781-201ENSMUST00000219792 443 ntBASIC16.57■□□□□ 0.24
Clcn1Q64347 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clcn1Q64347 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Clcn1Q64347 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Clcn1Q64347 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Clcn1Q64347 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms