Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Cln3Q61124 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cln3Q61124 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cln3Q61124 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cln3Q61124 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cln3Q61124 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cln3Q61124 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Cln3Q61124 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cln3Q61124 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cln3Q61124 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cln3Q61124 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cln3Q61124 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cln3Q61124 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.3□□□□□ -0.12
Cln3Q61124 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Cln3Q61124 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cln3Q61124 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Cln3Q61124 Gm12058-201ENSMUST00000118614 437 ntBASIC14.3□□□□□ -0.12
Cln3Q61124 Gm14109-201ENSMUST00000118814 309 ntBASIC14.3□□□□□ -0.12
Cln3Q61124 Gm12217-201ENSMUST00000118858 696 ntBASIC14.3□□□□□ -0.12
Cln3Q61124 Gm13736-201ENSMUST00000119272 253 ntBASIC14.3□□□□□ -0.12
Cln3Q61124 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cln3Q61124 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Cln3Q61124 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cln3Q61124 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Cln3Q61124 Gm25700-201ENSMUST00000177693 110 ntBASIC14.3□□□□□ -0.12
Cln3Q61124 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cln3Q61124 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC14.3□□□□□ -0.12
Cln3Q61124 Gm44262-201ENSMUST00000204969 372 ntBASIC14.3□□□□□ -0.12
Cln3Q61124 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC14.3□□□□□ -0.12
Cln3Q61124 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC14.3□□□□□ -0.12
Cln3Q61124 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC14.3□□□□□ -0.12
Cln3Q61124 CT009764.1-201ENSMUST00000222260 483 ntBASIC14.3□□□□□ -0.12
Cln3Q61124 Nsd1-205ENSMUST00000224693 852 ntBASIC14.3□□□□□ -0.12
Cln3Q61124 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Cln3Q61124 AC167013.1-201ENSMUST00000228592 202 ntBASIC14.3□□□□□ -0.12
Cln3Q61124 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cln3Q61124 Crry-ps-201ENSMUST00000079090 1309 ntBASIC14.3□□□□□ -0.12
Cln3Q61124 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cln3Q61124 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cln3Q61124 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cln3Q61124 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cln3Q61124 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.3□□□□□ -0.12
Cln3Q61124 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cln3Q61124 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cln3Q61124 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cln3Q61124 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cln3Q61124 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cln3Q61124 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Cln3Q61124 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Cln3Q61124 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cln3Q61124 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cln3Q61124 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cln3Q61124 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cln3Q61124 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cln3Q61124 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cln3Q61124 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cln3Q61124 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cln3Q61124 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cln3Q61124 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cln3Q61124 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cln3Q61124 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
Cln3Q61124 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cln3Q61124 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cln3Q61124 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Cln3Q61124 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cln3Q61124 Gm3096-201ENSMUST00000185770 364 ntBASIC14.29□□□□□ -0.12
Cln3Q61124 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC14.29□□□□□ -0.12
Cln3Q61124 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cln3Q61124 Gm9333-201ENSMUST00000205452 1323 ntBASIC14.29□□□□□ -0.12
Cln3Q61124 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cln3Q61124 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cln3Q61124 Gm6992-201ENSMUST00000217973 1607 ntBASIC14.29□□□□□ -0.12
Cln3Q61124 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cln3Q61124 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cln3Q61124 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cln3Q61124 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Cln3Q61124 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cln3Q61124 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Cln3Q61124 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cln3Q61124 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cln3Q61124 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cln3Q61124 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cln3Q61124 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.28□□□□□ -0.12
Cln3Q61124 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cln3Q61124 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cln3Q61124 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Cln3Q61124 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cln3Q61124 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cln3Q61124 Gm13665-201ENSMUST00000120830 528 ntBASIC14.28□□□□□ -0.12
Cln3Q61124 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cln3Q61124 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cln3Q61124 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cln3Q61124 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cln3Q61124 Gm44405-201ENSMUST00000198952 126 ntBASIC14.28□□□□□ -0.12
Cln3Q61124 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC14.28□□□□□ -0.12
Cln3Q61124 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cln3Q61124 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Cln3Q61124 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cln3Q61124 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC14.28□□□□□ -0.12
Cln3Q61124 AC161537.1-201ENSMUST00000226199 1015 ntBASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms