Protein–RNA interactions for Protein: Q60841

Reln, Reelin, mousemouse

Predictions only

Length 3,461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RelnQ60841 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
RelnQ60841 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC11.26□□□□□ -0.61
RelnQ60841 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
RelnQ60841 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
RelnQ60841 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
RelnQ60841 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.26□□□□□ -0.61
RelnQ60841 Gm28882-201ENSMUST00000185504 314 ntBASIC11.26□□□□□ -0.61
RelnQ60841 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.26□□□□□ -0.61
RelnQ60841 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RelnQ60841 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
RelnQ60841 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.26□□□□□ -0.61
RelnQ60841 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.26□□□□□ -0.61
RelnQ60841 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
RelnQ60841 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
RelnQ60841 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RelnQ60841 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RelnQ60841 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
RelnQ60841 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RelnQ60841 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
RelnQ60841 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
RelnQ60841 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
RelnQ60841 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
RelnQ60841 Gm8018-201ENSMUST00000173536 789 ntBASIC11.26□□□□□ -0.61
RelnQ60841 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
RelnQ60841 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC11.26□□□□□ -0.61
RelnQ60841 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RelnQ60841 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC11.26□□□□□ -0.61
RelnQ60841 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
RelnQ60841 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
RelnQ60841 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
RelnQ60841 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
RelnQ60841 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
RelnQ60841 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RelnQ60841 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
RelnQ60841 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RelnQ60841 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RelnQ60841 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
RelnQ60841 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
RelnQ60841 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RelnQ60841 Gm14034-201ENSMUST00000120147 551 ntBASIC11.25□□□□□ -0.61
RelnQ60841 Gm11980-201ENSMUST00000121445 986 ntBASIC11.25□□□□□ -0.61
RelnQ60841 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC11.25□□□□□ -0.61
RelnQ60841 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
RelnQ60841 Gm18974-201ENSMUST00000221478 1031 ntBASIC11.25□□□□□ -0.61
RelnQ60841 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RelnQ60841 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RelnQ60841 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
RelnQ60841 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
RelnQ60841 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC11.25□□□□□ -0.61
RelnQ60841 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RelnQ60841 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
RelnQ60841 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
RelnQ60841 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
RelnQ60841 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
RelnQ60841 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
RelnQ60841 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
RelnQ60841 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
RelnQ60841 Snora73b-201ENSMUST00000083419 205 ntBASIC11.25□□□□□ -0.61
RelnQ60841 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RelnQ60841 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RelnQ60841 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RelnQ60841 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RelnQ60841 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RelnQ60841 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
RelnQ60841 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
RelnQ60841 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RelnQ60841 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RelnQ60841 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
RelnQ60841 Gm15889-202ENSMUST00000212669 2443 ntBASIC11.25□□□□□ -0.61
RelnQ60841 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RelnQ60841 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
RelnQ60841 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
RelnQ60841 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC11.25□□□□□ -0.61
RelnQ60841 Gm22138-201ENSMUST00000158748 128 ntBASIC11.25□□□□□ -0.61
RelnQ60841 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
RelnQ60841 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RelnQ60841 Gm45856-201ENSMUST00000212752 416 ntBASIC11.25□□□□□ -0.61
RelnQ60841 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
RelnQ60841 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RelnQ60841 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
RelnQ60841 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RelnQ60841 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RelnQ60841 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC11.24□□□□□ -0.61
RelnQ60841 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RelnQ60841 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
RelnQ60841 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
RelnQ60841 Gm14274-201ENSMUST00000117182 615 ntBASIC11.24□□□□□ -0.61
RelnQ60841 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC11.24□□□□□ -0.61
RelnQ60841 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC11.24□□□□□ -0.61
RelnQ60841 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
RelnQ60841 AY036118-201ENSMUST00000200021 923 ntBASIC11.24□□□□□ -0.61
RelnQ60841 Rps2-ps12-201ENSMUST00000214262 785 ntBASIC11.24□□□□□ -0.61
RelnQ60841 Gm39404-201ENSMUST00000216350 313 ntBASIC11.24□□□□□ -0.61
RelnQ60841 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
RelnQ60841 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RelnQ60841 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RelnQ60841 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
RelnQ60841 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RelnQ60841 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RelnQ60841 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms