Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Xrcc1Q60596 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Xrcc1Q60596 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Xrcc1Q60596 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Xrcc1Q60596 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Xrcc1Q60596 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.54□□□□□ -0.4
Xrcc1Q60596 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.53□□□□□ -0.4
Xrcc1Q60596 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Xrcc1Q60596 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Xrcc1Q60596 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Xrcc1Q60596 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Xrcc1Q60596 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Xrcc1Q60596 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Xrcc1Q60596 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Xrcc1Q60596 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Xrcc1Q60596 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Xrcc1Q60596 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Xrcc1Q60596 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.53□□□□□ -0.4
Xrcc1Q60596 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Xrcc1Q60596 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.53□□□□□ -0.4
Xrcc1Q60596 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.53□□□□□ -0.4
Xrcc1Q60596 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Xrcc1Q60596 Gm14127-201ENSMUST00000117906 678 ntBASIC12.53□□□□□ -0.4
Xrcc1Q60596 Gm11425-201ENSMUST00000119608 498 ntBASIC12.53□□□□□ -0.4
Xrcc1Q60596 Gm16177-201ENSMUST00000120728 718 ntBASIC12.53□□□□□ -0.4
Xrcc1Q60596 Gm13123-201ENSMUST00000122173 492 ntBASIC12.53□□□□□ -0.4
Xrcc1Q60596 Gm11978-201ENSMUST00000122315 466 ntBASIC12.53□□□□□ -0.4
Xrcc1Q60596 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Xrcc1Q60596 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.53□□□□□ -0.4
Xrcc1Q60596 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.53□□□□□ -0.4
Xrcc1Q60596 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Xrcc1Q60596 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.53□□□□□ -0.4
Xrcc1Q60596 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Xrcc1Q60596 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Xrcc1Q60596 Gm9396-201ENSMUST00000076703 567 ntBASIC12.53□□□□□ -0.4
Xrcc1Q60596 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Xrcc1Q60596 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.53□□□□□ -0.4
Xrcc1Q60596 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Xrcc1Q60596 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Xrcc1Q60596 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Xrcc1Q60596 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.53□□□□□ -0.4
Xrcc1Q60596 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Xrcc1Q60596 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Xrcc1Q60596 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Xrcc1Q60596 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Xrcc1Q60596 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Xrcc1Q60596 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Xrcc1Q60596 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Xrcc1Q60596 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Xrcc1Q60596 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Xrcc1Q60596 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Xrcc1Q60596 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Xrcc1Q60596 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Xrcc1Q60596 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.52□□□□□ -0.4
Xrcc1Q60596 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Xrcc1Q60596 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Xrcc1Q60596 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.52□□□□□ -0.4
Xrcc1Q60596 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Xrcc1Q60596 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Xrcc1Q60596 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Xrcc1Q60596 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Xrcc1Q60596 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Xrcc1Q60596 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Xrcc1Q60596 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Xrcc1Q60596 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Xrcc1Q60596 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.52□□□□□ -0.41
Xrcc1Q60596 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Xrcc1Q60596 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.52□□□□□ -0.41
Xrcc1Q60596 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.52□□□□□ -0.41
Xrcc1Q60596 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC12.52□□□□□ -0.41
Xrcc1Q60596 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Xrcc1Q60596 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Xrcc1Q60596 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Xrcc1Q60596 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.52□□□□□ -0.41
Xrcc1Q60596 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.52□□□□□ -0.41
Xrcc1Q60596 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.52□□□□□ -0.41
Xrcc1Q60596 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Xrcc1Q60596 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Xrcc1Q60596 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Xrcc1Q60596 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Xrcc1Q60596 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.52□□□□□ -0.41
Xrcc1Q60596 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Xrcc1Q60596 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.52□□□□□ -0.41
Xrcc1Q60596 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Xrcc1Q60596 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Xrcc1Q60596 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Xrcc1Q60596 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
Xrcc1Q60596 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Xrcc1Q60596 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Xrcc1Q60596 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Xrcc1Q60596 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Xrcc1Q60596 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Xrcc1Q60596 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Xrcc1Q60596 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Xrcc1Q60596 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Xrcc1Q60596 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.52□□□□□ -0.41
Xrcc1Q60596 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Xrcc1Q60596 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Xrcc1Q60596 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Xrcc1Q60596 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms