Protein–RNA interactions for Protein: Q5SSA0

Vmn1r223, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r223Q5SSA0 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Vmn1r223Q5SSA0 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Vmn1r223Q5SSA0 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Vmn1r223Q5SSA0 Tmed9-203ENSMUST00000224741 1450 ntBASIC11.5□□□□□ -0.57
Vmn1r223Q5SSA0 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vmn1r223Q5SSA0 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vmn1r223Q5SSA0 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
Vmn1r223Q5SSA0 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Vmn1r223Q5SSA0 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vmn1r223Q5SSA0 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vmn1r223Q5SSA0 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vmn1r223Q5SSA0 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vmn1r223Q5SSA0 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vmn1r223Q5SSA0 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Vmn1r223Q5SSA0 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC11.49□□□□□ -0.57
Vmn1r223Q5SSA0 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vmn1r223Q5SSA0 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vmn1r223Q5SSA0 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Vmn1r223Q5SSA0 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Vmn1r223Q5SSA0 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vmn1r223Q5SSA0 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vmn1r223Q5SSA0 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vmn1r223Q5SSA0 Gm42690-201ENSMUST00000197921 1836 ntBASIC11.49□□□□□ -0.57
Vmn1r223Q5SSA0 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Vmn1r223Q5SSA0 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vmn1r223Q5SSA0 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Vmn1r223Q5SSA0 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Vmn1r223Q5SSA0 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vmn1r223Q5SSA0 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vmn1r223Q5SSA0 Gm15678-201ENSMUST00000117573 960 ntBASIC11.49□□□□□ -0.57
Vmn1r223Q5SSA0 Gm15240-201ENSMUST00000118156 720 ntBASIC11.49□□□□□ -0.57
Vmn1r223Q5SSA0 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
Vmn1r223Q5SSA0 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC11.49□□□□□ -0.57
Vmn1r223Q5SSA0 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vmn1r223Q5SSA0 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vmn1r223Q5SSA0 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC11.49□□□□□ -0.57
Vmn1r223Q5SSA0 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Vmn1r223Q5SSA0 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Vmn1r223Q5SSA0 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vmn1r223Q5SSA0 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vmn1r223Q5SSA0 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vmn1r223Q5SSA0 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vmn1r223Q5SSA0 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vmn1r223Q5SSA0 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vmn1r223Q5SSA0 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vmn1r223Q5SSA0 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC11.49□□□□□ -0.57
Vmn1r223Q5SSA0 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Vmn1r223Q5SSA0 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Vmn1r223Q5SSA0 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vmn1r223Q5SSA0 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Vmn1r223Q5SSA0 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Vmn1r223Q5SSA0 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vmn1r223Q5SSA0 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Vmn1r223Q5SSA0 Gm7899-201ENSMUST00000192935 1897 ntBASIC11.49□□□□□ -0.57
Vmn1r223Q5SSA0 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vmn1r223Q5SSA0 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Vmn1r223Q5SSA0 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vmn1r223Q5SSA0 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.48□□□□□ -0.57
Vmn1r223Q5SSA0 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vmn1r223Q5SSA0 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Vmn1r223Q5SSA0 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Vmn1r223Q5SSA0 Gm44891-201ENSMUST00000208817 2223 ntBASIC11.48□□□□□ -0.57
Vmn1r223Q5SSA0 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vmn1r223Q5SSA0 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vmn1r223Q5SSA0 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Vmn1r223Q5SSA0 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vmn1r223Q5SSA0 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vmn1r223Q5SSA0 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vmn1r223Q5SSA0 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
Vmn1r223Q5SSA0 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vmn1r223Q5SSA0 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.48□□□□□ -0.57
Vmn1r223Q5SSA0 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vmn1r223Q5SSA0 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC11.48□□□□□ -0.57
Vmn1r223Q5SSA0 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC11.48□□□□□ -0.57
Vmn1r223Q5SSA0 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Vmn1r223Q5SSA0 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Vmn1r223Q5SSA0 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Vmn1r223Q5SSA0 Gm16215-201ENSMUST00000161990 637 ntBASIC11.48□□□□□ -0.57
Vmn1r223Q5SSA0 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Vmn1r223Q5SSA0 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC11.48□□□□□ -0.57
Vmn1r223Q5SSA0 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vmn1r223Q5SSA0 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Vmn1r223Q5SSA0 Gm17795-201ENSMUST00000214505 757 ntBASIC11.48□□□□□ -0.57
Vmn1r223Q5SSA0 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Vmn1r223Q5SSA0 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC11.48□□□□□ -0.57
Vmn1r223Q5SSA0 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Vmn1r223Q5SSA0 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vmn1r223Q5SSA0 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vmn1r223Q5SSA0 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Vmn1r223Q5SSA0 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vmn1r223Q5SSA0 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vmn1r223Q5SSA0 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Vmn1r223Q5SSA0 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vmn1r223Q5SSA0 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Vmn1r223Q5SSA0 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vmn1r223Q5SSA0 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vmn1r223Q5SSA0 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vmn1r223Q5SSA0 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vmn1r223Q5SSA0 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vmn1r223Q5SSA0 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 95.9 ms