Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav5d-4Q5R1F6 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.27□□□□□ -0.6
Trav5d-4Q5R1F6 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Trav5d-4Q5R1F6 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav5d-4Q5R1F6 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav5d-4Q5R1F6 Gm42863-201ENSMUST00000197875 2958 ntBASIC11.27□□□□□ -0.61
Trav5d-4Q5R1F6 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav5d-4Q5R1F6 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav5d-4Q5R1F6 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav5d-4Q5R1F6 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Trav5d-4Q5R1F6 Gm6447-201ENSMUST00000118905 835 ntBASIC11.27□□□□□ -0.61
Trav5d-4Q5R1F6 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav5d-4Q5R1F6 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav5d-4Q5R1F6 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC11.27□□□□□ -0.61
Trav5d-4Q5R1F6 Gm6983-201ENSMUST00000214912 628 ntBASIC11.27□□□□□ -0.61
Trav5d-4Q5R1F6 CT025535.1-201ENSMUST00000227172 491 ntBASIC11.27□□□□□ -0.61
Trav5d-4Q5R1F6 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav5d-4Q5R1F6 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav5d-4Q5R1F6 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Trav5d-4Q5R1F6 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav5d-4Q5R1F6 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav5d-4Q5R1F6 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC11.27□□□□□ -0.61
Trav5d-4Q5R1F6 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
Trav5d-4Q5R1F6 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav5d-4Q5R1F6 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav5d-4Q5R1F6 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav5d-4Q5R1F6 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC11.27□□□□□ -0.61
Trav5d-4Q5R1F6 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav5d-4Q5R1F6 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC11.27□□□□□ -0.61
Trav5d-4Q5R1F6 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC11.27□□□□□ -0.61
Trav5d-4Q5R1F6 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav5d-4Q5R1F6 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav5d-4Q5R1F6 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav5d-4Q5R1F6 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav5d-4Q5R1F6 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC11.26□□□□□ -0.61
Trav5d-4Q5R1F6 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Trav5d-4Q5R1F6 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav5d-4Q5R1F6 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav5d-4Q5R1F6 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav5d-4Q5R1F6 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav5d-4Q5R1F6 Gm5385-201ENSMUST00000118988 1559 ntBASIC11.26□□□□□ -0.61
Trav5d-4Q5R1F6 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav5d-4Q5R1F6 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav5d-4Q5R1F6 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav5d-4Q5R1F6 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Trav5d-4Q5R1F6 Gm5303-201ENSMUST00000117943 1252 ntBASIC11.26□□□□□ -0.61
Trav5d-4Q5R1F6 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC11.26□□□□□ -0.61
Trav5d-4Q5R1F6 Gm15429-201ENSMUST00000151268 798 ntBASIC11.26□□□□□ -0.61
Trav5d-4Q5R1F6 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav5d-4Q5R1F6 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC11.26□□□□□ -0.61
Trav5d-4Q5R1F6 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav5d-4Q5R1F6 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav5d-4Q5R1F6 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav5d-4Q5R1F6 Gm7446-201ENSMUST00000221035 1240 ntBASIC11.26□□□□□ -0.61
Trav5d-4Q5R1F6 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC11.26□□□□□ -0.61
Trav5d-4Q5R1F6 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav5d-4Q5R1F6 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav5d-4Q5R1F6 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav5d-4Q5R1F6 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC11.26□□□□□ -0.61
Trav5d-4Q5R1F6 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Trav5d-4Q5R1F6 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav5d-4Q5R1F6 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav5d-4Q5R1F6 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Trav5d-4Q5R1F6 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav5d-4Q5R1F6 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC11.26□□□□□ -0.61
Trav5d-4Q5R1F6 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav5d-4Q5R1F6 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
Trav5d-4Q5R1F6 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav5d-4Q5R1F6 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav5d-4Q5R1F6 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav5d-4Q5R1F6 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav5d-4Q5R1F6 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Trav5d-4Q5R1F6 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav5d-4Q5R1F6 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav5d-4Q5R1F6 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav5d-4Q5R1F6 Gm45003-201ENSMUST00000205875 2158 ntBASIC11.26□□□□□ -0.61
Trav5d-4Q5R1F6 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Trav5d-4Q5R1F6 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav5d-4Q5R1F6 Ssr1-203ENSMUST00000225246 1825 ntBASIC11.25□□□□□ -0.61
Trav5d-4Q5R1F6 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav5d-4Q5R1F6 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav5d-4Q5R1F6 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.25□□□□□ -0.61
Trav5d-4Q5R1F6 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav5d-4Q5R1F6 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav5d-4Q5R1F6 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav5d-4Q5R1F6 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav5d-4Q5R1F6 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC11.25□□□□□ -0.61
Trav5d-4Q5R1F6 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav5d-4Q5R1F6 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Trav5d-4Q5R1F6 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav5d-4Q5R1F6 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC11.25□□□□□ -0.61
Trav5d-4Q5R1F6 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav5d-4Q5R1F6 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav5d-4Q5R1F6 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav5d-4Q5R1F6 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC11.25□□□□□ -0.61
Trav5d-4Q5R1F6 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC11.25□□□□□ -0.61
Trav5d-4Q5R1F6 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC11.25□□□□□ -0.61
Trav5d-4Q5R1F6 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Trav5d-4Q5R1F6 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav5d-4Q5R1F6 Gm44397-201ENSMUST00000195950 113 ntBASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms