Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3-3Q5R1C3 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC9.83□□□□□ -0.84
Trav3-3Q5R1C3 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3-3Q5R1C3 AC159195.1-201ENSMUST00000225867 2086 ntBASIC9.83□□□□□ -0.84
Trav3-3Q5R1C3 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Trav3-3Q5R1C3 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Trav3-3Q5R1C3 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3-3Q5R1C3 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3-3Q5R1C3 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC9.82□□□□□ -0.84
Trav3-3Q5R1C3 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3-3Q5R1C3 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3-3Q5R1C3 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3-3Q5R1C3 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3-3Q5R1C3 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC9.82□□□□□ -0.84
Trav3-3Q5R1C3 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3-3Q5R1C3 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3-3Q5R1C3 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3-3Q5R1C3 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Trav3-3Q5R1C3 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Trav3-3Q5R1C3 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Trav3-3Q5R1C3 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3-3Q5R1C3 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3-3Q5R1C3 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3-3Q5R1C3 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Trav3-3Q5R1C3 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC9.82□□□□□ -0.84
Trav3-3Q5R1C3 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
Trav3-3Q5R1C3 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC9.82□□□□□ -0.84
Trav3-3Q5R1C3 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3-3Q5R1C3 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC9.82□□□□□ -0.84
Trav3-3Q5R1C3 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Trav3-3Q5R1C3 Mir5131-201ENSMUST00000175426 93 ntBASIC9.82□□□□□ -0.84
Trav3-3Q5R1C3 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC9.82□□□□□ -0.84
Trav3-3Q5R1C3 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC9.82□□□□□ -0.84
Trav3-3Q5R1C3 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC9.82□□□□□ -0.84
Trav3-3Q5R1C3 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC9.82□□□□□ -0.84
Trav3-3Q5R1C3 AC132467.2-202ENSMUST00000227726 559 ntBASIC9.82□□□□□ -0.84
Trav3-3Q5R1C3 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3-3Q5R1C3 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3-3Q5R1C3 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3-3Q5R1C3 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC9.82□□□□□ -0.84
Trav3-3Q5R1C3 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3-3Q5R1C3 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC9.82□□□□□ -0.84
Trav3-3Q5R1C3 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC9.82□□□□□ -0.84
Trav3-3Q5R1C3 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Trav3-3Q5R1C3 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3-3Q5R1C3 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC9.82□□□□□ -0.84
Trav3-3Q5R1C3 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC9.82□□□□□ -0.84
Trav3-3Q5R1C3 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3-3Q5R1C3 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3-3Q5R1C3 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3-3Q5R1C3 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Trav3-3Q5R1C3 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3-3Q5R1C3 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3-3Q5R1C3 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3-3Q5R1C3 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3-3Q5R1C3 AC122811.1-201ENSMUST00000222257 2921 ntBASIC9.82□□□□□ -0.84
Trav3-3Q5R1C3 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC9.82□□□□□ -0.84
Trav3-3Q5R1C3 Gm43365-201ENSMUST00000196522 2106 ntBASIC9.82□□□□□ -0.84
Trav3-3Q5R1C3 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3-3Q5R1C3 Gm37437-201ENSMUST00000194451 1937 ntBASIC9.82□□□□□ -0.84
Trav3-3Q5R1C3 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC9.82□□□□□ -0.84
Trav3-3Q5R1C3 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3-3Q5R1C3 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3-3Q5R1C3 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3-3Q5R1C3 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3-3Q5R1C3 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3-3Q5R1C3 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3-3Q5R1C3 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3-3Q5R1C3 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3-3Q5R1C3 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3-3Q5R1C3 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3-3Q5R1C3 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Trav3-3Q5R1C3 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3-3Q5R1C3 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3-3Q5R1C3 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3-3Q5R1C3 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC9.81□□□□□ -0.84
Trav3-3Q5R1C3 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Trav3-3Q5R1C3 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3-3Q5R1C3 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3-3Q5R1C3 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC9.81□□□□□ -0.84
Trav3-3Q5R1C3 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC9.81□□□□□ -0.84
Trav3-3Q5R1C3 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Trav3-3Q5R1C3 Gm16198-201ENSMUST00000118766 670 ntBASIC9.81□□□□□ -0.84
Trav3-3Q5R1C3 Gm12350-201ENSMUST00000121208 462 ntBASIC9.81□□□□□ -0.84
Trav3-3Q5R1C3 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3-3Q5R1C3 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3-3Q5R1C3 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3-3Q5R1C3 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC9.81□□□□□ -0.84
Trav3-3Q5R1C3 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3-3Q5R1C3 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3-3Q5R1C3 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3-3Q5R1C3 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3-3Q5R1C3 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC9.81□□□□□ -0.84
Trav3-3Q5R1C3 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC9.81□□□□□ -0.84
Trav3-3Q5R1C3 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3-3Q5R1C3 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3-3Q5R1C3 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3-3Q5R1C3 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3-3Q5R1C3 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3-3Q5R1C3 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms