Protein–RNA interactions for Protein: Q5PSV9

Mdc1, Mediator of DNA damage checkpoint protein 1, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mdc1Q5PSV9 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Mdc1Q5PSV9 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Mdc1Q5PSV9 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Mdc1Q5PSV9 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
Mdc1Q5PSV9 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Mdc1Q5PSV9 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Mdc1Q5PSV9 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Mdc1Q5PSV9 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Mdc1Q5PSV9 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC16.89■□□□□ 0.29
Mdc1Q5PSV9 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC16.89■□□□□ 0.29
Mdc1Q5PSV9 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC16.89■□□□□ 0.29
Mdc1Q5PSV9 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Mdc1Q5PSV9 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Mdc1Q5PSV9 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Mdc1Q5PSV9 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mdc1Q5PSV9 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC16.88■□□□□ 0.29
Mdc1Q5PSV9 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mdc1Q5PSV9 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mdc1Q5PSV9 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC16.88■□□□□ 0.29
Mdc1Q5PSV9 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mdc1Q5PSV9 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mdc1Q5PSV9 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Mdc1Q5PSV9 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mdc1Q5PSV9 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Mdc1Q5PSV9 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Mdc1Q5PSV9 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mdc1Q5PSV9 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC16.88■□□□□ 0.29
Mdc1Q5PSV9 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC16.88■□□□□ 0.29
Mdc1Q5PSV9 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Mdc1Q5PSV9 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mdc1Q5PSV9 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC16.88■□□□□ 0.29
Mdc1Q5PSV9 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC16.88■□□□□ 0.29
Mdc1Q5PSV9 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Mdc1Q5PSV9 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mdc1Q5PSV9 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mdc1Q5PSV9 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mdc1Q5PSV9 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mdc1Q5PSV9 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC16.88■□□□□ 0.29
Mdc1Q5PSV9 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mdc1Q5PSV9 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mdc1Q5PSV9 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Mdc1Q5PSV9 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Mdc1Q5PSV9 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mdc1Q5PSV9 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mdc1Q5PSV9 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mdc1Q5PSV9 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Mdc1Q5PSV9 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mdc1Q5PSV9 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Mdc1Q5PSV9 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mdc1Q5PSV9 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mdc1Q5PSV9 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC16.87■□□□□ 0.29
Mdc1Q5PSV9 Selenot-ps-201ENSMUST00000119098 593 ntBASIC16.87■□□□□ 0.29
Mdc1Q5PSV9 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC16.87■□□□□ 0.29
Mdc1Q5PSV9 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Mdc1Q5PSV9 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Mdc1Q5PSV9 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Mdc1Q5PSV9 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Mdc1Q5PSV9 Gm5385-201ENSMUST00000118988 1559 ntBASIC16.87■□□□□ 0.29
Mdc1Q5PSV9 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Mdc1Q5PSV9 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Mdc1Q5PSV9 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Mdc1Q5PSV9 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Mdc1Q5PSV9 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Mdc1Q5PSV9 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Mdc1Q5PSV9 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Mdc1Q5PSV9 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC16.87■□□□□ 0.29
Mdc1Q5PSV9 Il17rd-203ENSMUST00000225146 3366 ntBASIC16.87■□□□□ 0.29
Mdc1Q5PSV9 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC16.87■□□□□ 0.29
Mdc1Q5PSV9 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
Mdc1Q5PSV9 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC16.87■□□□□ 0.29
Mdc1Q5PSV9 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Mdc1Q5PSV9 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Mdc1Q5PSV9 Gm20426-201ENSMUST00000173657 440 ntBASIC16.87■□□□□ 0.29
Mdc1Q5PSV9 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC16.87■□□□□ 0.29
Mdc1Q5PSV9 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC16.87■□□□□ 0.29
Mdc1Q5PSV9 Gzmn-202ENSMUST00000225535 989 ntBASIC16.87■□□□□ 0.29
Mdc1Q5PSV9 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Mdc1Q5PSV9 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Mdc1Q5PSV9 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Mdc1Q5PSV9 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
Mdc1Q5PSV9 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Mdc1Q5PSV9 Gm2673-201ENSMUST00000120958 1608 ntBASIC16.86■□□□□ 0.29
Mdc1Q5PSV9 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Mdc1Q5PSV9 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Mdc1Q5PSV9 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
Mdc1Q5PSV9 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Mdc1Q5PSV9 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Mdc1Q5PSV9 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Mdc1Q5PSV9 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Mdc1Q5PSV9 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Mdc1Q5PSV9 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Mdc1Q5PSV9 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Mdc1Q5PSV9 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
Mdc1Q5PSV9 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Mdc1Q5PSV9 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC16.86■□□□□ 0.29
Mdc1Q5PSV9 Gm5863-201ENSMUST00000121760 1008 ntBASIC16.86■□□□□ 0.29
Mdc1Q5PSV9 Gm27438-201ENSMUST00000183480 110 ntBASIC16.86■□□□□ 0.29
Mdc1Q5PSV9 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC16.86■□□□□ 0.29
Mdc1Q5PSV9 Gm45219-201ENSMUST00000205602 465 ntBASIC16.86■□□□□ 0.29
Mdc1Q5PSV9 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms