Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Trim41Q5NCC3 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Trim41Q5NCC3 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC22.67■■□□□ 1.22
Trim41Q5NCC3 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC22.67■■□□□ 1.22
Trim41Q5NCC3 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Trim41Q5NCC3 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
Trim41Q5NCC3 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC22.67■■□□□ 1.22
Trim41Q5NCC3 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC22.67■■□□□ 1.22
Trim41Q5NCC3 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Trim41Q5NCC3 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC22.67■■□□□ 1.22
Trim41Q5NCC3 Gm42779-201ENSMUST00000198807 406 ntBASIC22.67■■□□□ 1.22
Trim41Q5NCC3 Gm44772-201ENSMUST00000207623 1191 ntBASIC22.67■■□□□ 1.22
Trim41Q5NCC3 Gm8285-201ENSMUST00000208293 759 ntBASIC22.67■■□□□ 1.22
Trim41Q5NCC3 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
Trim41Q5NCC3 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Trim41Q5NCC3 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
Trim41Q5NCC3 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Trim41Q5NCC3 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Trim41Q5NCC3 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC22.67■■□□□ 1.22
Trim41Q5NCC3 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Trim41Q5NCC3 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC22.67■■□□□ 1.22
Trim41Q5NCC3 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
Trim41Q5NCC3 CU062626.3-201ENSMUST00000225522 1411 ntBASIC22.66■■□□□ 1.22
Trim41Q5NCC3 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Trim41Q5NCC3 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Trim41Q5NCC3 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Trim41Q5NCC3 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Trim41Q5NCC3 Gm38157-201ENSMUST00000194178 1698 ntBASIC22.66■■□□□ 1.22
Trim41Q5NCC3 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Trim41Q5NCC3 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC22.66■■□□□ 1.22
Trim41Q5NCC3 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Trim41Q5NCC3 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC22.66■■□□□ 1.22
Trim41Q5NCC3 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC22.66■■□□□ 1.22
Trim41Q5NCC3 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC22.66■■□□□ 1.22
Trim41Q5NCC3 AC174797.2-202ENSMUST00000225729 568 ntBASIC22.66■■□□□ 1.22
Trim41Q5NCC3 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Trim41Q5NCC3 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Trim41Q5NCC3 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
Trim41Q5NCC3 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
Trim41Q5NCC3 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
Trim41Q5NCC3 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC22.66■■□□□ 1.22
Trim41Q5NCC3 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC22.66■■□□□ 1.22
Trim41Q5NCC3 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC22.66■■□□□ 1.22
Trim41Q5NCC3 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Trim41Q5NCC3 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Trim41Q5NCC3 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Trim41Q5NCC3 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Trim41Q5NCC3 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC22.65■■□□□ 1.22
Trim41Q5NCC3 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Trim41Q5NCC3 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Trim41Q5NCC3 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Trim41Q5NCC3 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Trim41Q5NCC3 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Trim41Q5NCC3 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
Trim41Q5NCC3 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Trim41Q5NCC3 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Trim41Q5NCC3 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC22.65■■□□□ 1.22
Trim41Q5NCC3 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
Trim41Q5NCC3 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC22.65■■□□□ 1.22
Trim41Q5NCC3 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC22.65■■□□□ 1.22
Trim41Q5NCC3 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC22.65■■□□□ 1.22
Trim41Q5NCC3 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Trim41Q5NCC3 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
Trim41Q5NCC3 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Trim41Q5NCC3 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Trim41Q5NCC3 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Trim41Q5NCC3 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC22.65■■□□□ 1.22
Trim41Q5NCC3 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Trim41Q5NCC3 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Trim41Q5NCC3 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
Trim41Q5NCC3 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC22.64■■□□□ 1.22
Trim41Q5NCC3 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC22.64■■□□□ 1.22
Trim41Q5NCC3 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
Trim41Q5NCC3 Gm8862-201ENSMUST00000198379 1346 ntBASIC22.64■■□□□ 1.22
Trim41Q5NCC3 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.22
Trim41Q5NCC3 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.22
Trim41Q5NCC3 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Trim41Q5NCC3 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC22.64■■□□□ 1.22
Trim41Q5NCC3 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Trim41Q5NCC3 Gm12502-201ENSMUST00000120197 444 ntBASIC22.64■■□□□ 1.21
Trim41Q5NCC3 Gm23699-201ENSMUST00000158835 135 ntBASIC22.64■■□□□ 1.21
Trim41Q5NCC3 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
Trim41Q5NCC3 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC22.64■■□□□ 1.21
Trim41Q5NCC3 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC22.64■■□□□ 1.21
Trim41Q5NCC3 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
Trim41Q5NCC3 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
Trim41Q5NCC3 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
Trim41Q5NCC3 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Trim41Q5NCC3 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC22.64■■□□□ 1.21
Trim41Q5NCC3 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC22.64■■□□□ 1.21
Trim41Q5NCC3 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Trim41Q5NCC3 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Trim41Q5NCC3 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Trim41Q5NCC3 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Trim41Q5NCC3 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Trim41Q5NCC3 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Trim41Q5NCC3 CT009713.10-201ENSMUST00000225013 1986 ntBASIC22.63■■□□□ 1.21
Trim41Q5NCC3 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC22.63■■□□□ 1.21
Trim41Q5NCC3 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Trim41Q5NCC3 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC22.63■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms