Protein–RNA interactions for Protein: Q3V036

Ccdc27, Coiled-coil domain-containing protein 27, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc27Q3V036 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc27Q3V036 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc27Q3V036 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Ccdc27Q3V036 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
Ccdc27Q3V036 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc27Q3V036 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc27Q3V036 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Ccdc27Q3V036 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc27Q3V036 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc27Q3V036 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Ccdc27Q3V036 AC161252.3-201ENSMUST00000225465 1549 ntBASIC16.71■□□□□ 0.27
Ccdc27Q3V036 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc27Q3V036 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc27Q3V036 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Ccdc27Q3V036 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc27Q3V036 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc27Q3V036 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc27Q3V036 Gm4782-201ENSMUST00000168705 2046 ntBASIC16.71■□□□□ 0.27
Ccdc27Q3V036 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Ccdc27Q3V036 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC16.71■□□□□ 0.27
Ccdc27Q3V036 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Ccdc27Q3V036 Mir8102-201ENSMUST00000184148 139 ntBASIC16.71■□□□□ 0.27
Ccdc27Q3V036 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc27Q3V036 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc27Q3V036 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC16.71■□□□□ 0.27
Ccdc27Q3V036 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC16.71■□□□□ 0.27
Ccdc27Q3V036 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Ccdc27Q3V036 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc27Q3V036 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC16.71■□□□□ 0.27
Ccdc27Q3V036 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc27Q3V036 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc27Q3V036 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc27Q3V036 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Ccdc27Q3V036 Gm3695-201ENSMUST00000087222 1009 ntBASIC16.71■□□□□ 0.27
Ccdc27Q3V036 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Ccdc27Q3V036 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc27Q3V036 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc27Q3V036 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC16.71■□□□□ 0.27
Ccdc27Q3V036 Gm44086-201ENSMUST00000203251 2349 ntBASIC16.71■□□□□ 0.27
Ccdc27Q3V036 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Ccdc27Q3V036 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc27Q3V036 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc27Q3V036 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc27Q3V036 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc27Q3V036 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Ccdc27Q3V036 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Ccdc27Q3V036 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
Ccdc27Q3V036 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc27Q3V036 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc27Q3V036 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc27Q3V036 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc27Q3V036 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc27Q3V036 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc27Q3V036 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc27Q3V036 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Ccdc27Q3V036 Gm37014-201ENSMUST00000194723 2253 ntBASIC16.7■□□□□ 0.26
Ccdc27Q3V036 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc27Q3V036 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc27Q3V036 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc27Q3V036 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC16.7■□□□□ 0.26
Ccdc27Q3V036 Gm15487-201ENSMUST00000122373 465 ntBASIC16.7■□□□□ 0.26
Ccdc27Q3V036 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc27Q3V036 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc27Q3V036 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc27Q3V036 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc27Q3V036 Mir7684-201ENSMUST00000183858 60 ntBASIC16.7■□□□□ 0.26
Ccdc27Q3V036 Gm27838-201ENSMUST00000184829 128 ntBASIC16.7■□□□□ 0.26
Ccdc27Q3V036 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc27Q3V036 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC16.7■□□□□ 0.26
Ccdc27Q3V036 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC16.7■□□□□ 0.26
Ccdc27Q3V036 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc27Q3V036 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Ccdc27Q3V036 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc27Q3V036 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Ccdc27Q3V036 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Ccdc27Q3V036 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc27Q3V036 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc27Q3V036 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc27Q3V036 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc27Q3V036 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc27Q3V036 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc27Q3V036 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc27Q3V036 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc27Q3V036 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc27Q3V036 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc27Q3V036 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc27Q3V036 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Ccdc27Q3V036 CT009757.3-201ENSMUST00000223367 2320 ntBASIC16.69■□□□□ 0.26
Ccdc27Q3V036 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc27Q3V036 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc27Q3V036 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc27Q3V036 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc27Q3V036 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
Ccdc27Q3V036 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc27Q3V036 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc27Q3V036 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Ccdc27Q3V036 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc27Q3V036 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc27Q3V036 Gm12151-201ENSMUST00000121374 290 ntBASIC16.69■□□□□ 0.26
Ccdc27Q3V036 Gm21854-201ENSMUST00000179901 471 ntBASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms