Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Gm5369-201ENSMUST00000217499 588 ntBASIC18.91■□□□□ 0.62
Arhgef40Q3UPH7 Dhrs4-202ENSMUST00000226168 828 ntBASIC18.91■□□□□ 0.62
Arhgef40Q3UPH7 AC138604.1-201ENSMUST00000226969 739 ntBASIC18.91■□□□□ 0.62
Arhgef40Q3UPH7 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Arhgef40Q3UPH7 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Arhgef40Q3UPH7 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Arhgef40Q3UPH7 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Arhgef40Q3UPH7 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Arhgef40Q3UPH7 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Arhgef40Q3UPH7 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Arhgef40Q3UPH7 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Arhgef40Q3UPH7 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Arhgef40Q3UPH7 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Arhgef40Q3UPH7 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Arhgef40Q3UPH7 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Arhgef40Q3UPH7 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Arhgef40Q3UPH7 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Arhgef40Q3UPH7 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC18.91■□□□□ 0.62
Arhgef40Q3UPH7 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Arhgef40Q3UPH7 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Arhgef40Q3UPH7 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Arhgef40Q3UPH7 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Arhgef40Q3UPH7 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Arhgef40Q3UPH7 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Arhgef40Q3UPH7 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Arhgef40Q3UPH7 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Arhgef40Q3UPH7 Gm11667-201ENSMUST00000119828 486 ntBASIC18.9■□□□□ 0.62
Arhgef40Q3UPH7 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC18.9■□□□□ 0.62
Arhgef40Q3UPH7 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC18.9■□□□□ 0.62
Arhgef40Q3UPH7 Gm17040-202ENSMUST00000170597 889 ntBASIC18.9■□□□□ 0.62
Arhgef40Q3UPH7 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC18.9■□□□□ 0.62
Arhgef40Q3UPH7 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC18.9■□□□□ 0.62
Arhgef40Q3UPH7 AC122876.1-201ENSMUST00000217619 825 ntBASIC18.9■□□□□ 0.62
Arhgef40Q3UPH7 Gm21027-201ENSMUST00000219300 1236 ntBASIC18.9■□□□□ 0.62
Arhgef40Q3UPH7 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Arhgef40Q3UPH7 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Arhgef40Q3UPH7 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC18.9■□□□□ 0.62
Arhgef40Q3UPH7 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Arhgef40Q3UPH7 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Arhgef40Q3UPH7 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Arhgef40Q3UPH7 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Arhgef40Q3UPH7 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Arhgef40Q3UPH7 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC18.9■□□□□ 0.62
Arhgef40Q3UPH7 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Arhgef40Q3UPH7 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Arhgef40Q3UPH7 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Arhgef40Q3UPH7 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Arhgef40Q3UPH7 Gm44891-201ENSMUST00000208817 2223 ntBASIC18.9■□□□□ 0.62
Arhgef40Q3UPH7 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Arhgef40Q3UPH7 Gm14644-201ENSMUST00000116671 647 ntBASIC18.9■□□□□ 0.62
Arhgef40Q3UPH7 Gm23699-201ENSMUST00000158835 135 ntBASIC18.9■□□□□ 0.62
Arhgef40Q3UPH7 Gm5616-201ENSMUST00000165252 384 ntBASIC18.9■□□□□ 0.62
Arhgef40Q3UPH7 Gm8741-201ENSMUST00000174736 384 ntBASIC18.9■□□□□ 0.62
Arhgef40Q3UPH7 Gm7207-201ENSMUST00000211575 1067 ntBASIC18.9■□□□□ 0.62
Arhgef40Q3UPH7 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Arhgef40Q3UPH7 Spcs1-203ENSMUST00000226374 592 ntBASIC18.9■□□□□ 0.62
Arhgef40Q3UPH7 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC18.9■□□□□ 0.62
Arhgef40Q3UPH7 Gm10076-201ENSMUST00000073238 384 ntBASIC18.9■□□□□ 0.62
Arhgef40Q3UPH7 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Arhgef40Q3UPH7 AC137842.1-201ENSMUST00000227896 2064 ntBASIC18.89■□□□□ 0.62
Arhgef40Q3UPH7 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Arhgef40Q3UPH7 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Arhgef40Q3UPH7 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Arhgef40Q3UPH7 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Arhgef40Q3UPH7 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
Arhgef40Q3UPH7 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Arhgef40Q3UPH7 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Arhgef40Q3UPH7 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC18.89■□□□□ 0.61
Arhgef40Q3UPH7 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Arhgef40Q3UPH7 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Arhgef40Q3UPH7 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Arhgef40Q3UPH7 Gm9924-202ENSMUST00000192760 2311 ntBASIC18.89■□□□□ 0.61
Arhgef40Q3UPH7 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Arhgef40Q3UPH7 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC18.89■□□□□ 0.61
Arhgef40Q3UPH7 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Arhgef40Q3UPH7 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Arhgef40Q3UPH7 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Arhgef40Q3UPH7 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Arhgef40Q3UPH7 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC18.89■□□□□ 0.61
Arhgef40Q3UPH7 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC18.89■□□□□ 0.61
Arhgef40Q3UPH7 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Arhgef40Q3UPH7 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC18.89■□□□□ 0.61
Arhgef40Q3UPH7 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Arhgef40Q3UPH7 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Arhgef40Q3UPH7 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
Arhgef40Q3UPH7 Gm7848-201ENSMUST00000210739 718 ntBASIC18.89■□□□□ 0.61
Arhgef40Q3UPH7 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC18.89■□□□□ 0.61
Arhgef40Q3UPH7 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Arhgef40Q3UPH7 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Arhgef40Q3UPH7 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Arhgef40Q3UPH7 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Arhgef40Q3UPH7 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Arhgef40Q3UPH7 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Arhgef40Q3UPH7 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Arhgef40Q3UPH7 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC18.88■□□□□ 0.61
Arhgef40Q3UPH7 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Arhgef40Q3UPH7 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Arhgef40Q3UPH7 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
Arhgef40Q3UPH7 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC18.88■□□□□ 0.61
Arhgef40Q3UPH7 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms