Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col5a2Q3U962 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col5a2Q3U962 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Col5a2Q3U962 Gm12626-201ENSMUST00000117339 1983 ntBASIC15.32■□□□□ 0.04
Col5a2Q3U962 Gm12623-201ENSMUST00000119849 1983 ntBASIC15.32■□□□□ 0.04
Col5a2Q3U962 Gm43134-201ENSMUST00000199434 1886 ntBASIC15.32■□□□□ 0.04
Col5a2Q3U962 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col5a2Q3U962 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col5a2Q3U962 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col5a2Q3U962 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col5a2Q3U962 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col5a2Q3U962 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC15.32■□□□□ 0.04
Col5a2Q3U962 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Col5a2Q3U962 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Col5a2Q3U962 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC15.32■□□□□ 0.04
Col5a2Q3U962 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC15.32■□□□□ 0.04
Col5a2Q3U962 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Col5a2Q3U962 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC15.32■□□□□ 0.04
Col5a2Q3U962 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Col5a2Q3U962 Gm37905-201ENSMUST00000195310 341 ntBASIC15.32■□□□□ 0.04
Col5a2Q3U962 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC15.32■□□□□ 0.04
Col5a2Q3U962 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC15.32■□□□□ 0.04
Col5a2Q3U962 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC15.32■□□□□ 0.04
Col5a2Q3U962 AC163667.3-201ENSMUST00000225774 222 ntBASIC15.32■□□□□ 0.04
Col5a2Q3U962 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col5a2Q3U962 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Col5a2Q3U962 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col5a2Q3U962 Gm4782-201ENSMUST00000168705 2046 ntBASIC15.32■□□□□ 0.04
Col5a2Q3U962 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Col5a2Q3U962 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col5a2Q3U962 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col5a2Q3U962 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Col5a2Q3U962 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col5a2Q3U962 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col5a2Q3U962 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col5a2Q3U962 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Col5a2Q3U962 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.31■□□□□ 0.04
Col5a2Q3U962 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col5a2Q3U962 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col5a2Q3U962 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.31■□□□□ 0.04
Col5a2Q3U962 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Col5a2Q3U962 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col5a2Q3U962 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col5a2Q3U962 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Col5a2Q3U962 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col5a2Q3U962 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC15.31■□□□□ 0.04
Col5a2Q3U962 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC15.31■□□□□ 0.04
Col5a2Q3U962 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC15.31■□□□□ 0.04
Col5a2Q3U962 Gm7666-201ENSMUST00000146631 819 ntBASIC15.31■□□□□ 0.04
Col5a2Q3U962 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC15.31■□□□□ 0.04
Col5a2Q3U962 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Col5a2Q3U962 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col5a2Q3U962 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Col5a2Q3U962 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col5a2Q3U962 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.31■□□□□ 0.04
Col5a2Q3U962 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Col5a2Q3U962 Gm14752-201ENSMUST00000120719 2075 ntBASIC15.31■□□□□ 0.04
Col5a2Q3U962 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Col5a2Q3U962 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Col5a2Q3U962 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Col5a2Q3U962 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col5a2Q3U962 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Col5a2Q3U962 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Col5a2Q3U962 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col5a2Q3U962 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Col5a2Q3U962 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col5a2Q3U962 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col5a2Q3U962 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Col5a2Q3U962 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Col5a2Q3U962 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col5a2Q3U962 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Col5a2Q3U962 Gm14058-201ENSMUST00000116082 735 ntBASIC15.3■□□□□ 0.04
Col5a2Q3U962 Gm12314-201ENSMUST00000118104 538 ntBASIC15.3■□□□□ 0.04
Col5a2Q3U962 Gm15711-201ENSMUST00000118889 535 ntBASIC15.3■□□□□ 0.04
Col5a2Q3U962 Gm12029-201ENSMUST00000120073 832 ntBASIC15.3■□□□□ 0.04
Col5a2Q3U962 Gm14460-201ENSMUST00000121511 639 ntBASIC15.3■□□□□ 0.04
Col5a2Q3U962 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC15.3■□□□□ 0.04
Col5a2Q3U962 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Col5a2Q3U962 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col5a2Q3U962 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Col5a2Q3U962 Gm29615-201ENSMUST00000185371 697 ntBASIC15.3■□□□□ 0.04
Col5a2Q3U962 Gm28882-201ENSMUST00000185504 314 ntBASIC15.3■□□□□ 0.04
Col5a2Q3U962 Gm28224-201ENSMUST00000186078 697 ntBASIC15.3■□□□□ 0.04
Col5a2Q3U962 Gm29001-201ENSMUST00000186177 697 ntBASIC15.3■□□□□ 0.04
Col5a2Q3U962 Gm28292-201ENSMUST00000186593 697 ntBASIC15.3■□□□□ 0.04
Col5a2Q3U962 Gm28101-201ENSMUST00000187608 697 ntBASIC15.3■□□□□ 0.04
Col5a2Q3U962 Gm29076-201ENSMUST00000187689 697 ntBASIC15.3■□□□□ 0.04
Col5a2Q3U962 Gm28302-201ENSMUST00000187931 697 ntBASIC15.3■□□□□ 0.04
Col5a2Q3U962 Gm28646-201ENSMUST00000188220 697 ntBASIC15.3■□□□□ 0.04
Col5a2Q3U962 Gm28205-201ENSMUST00000189177 697 ntBASIC15.3■□□□□ 0.04
Col5a2Q3U962 Gm29032-201ENSMUST00000189797 697 ntBASIC15.3■□□□□ 0.04
Col5a2Q3U962 Gm28695-201ENSMUST00000190300 697 ntBASIC15.3■□□□□ 0.04
Col5a2Q3U962 Gm37448-201ENSMUST00000192795 697 ntBASIC15.3■□□□□ 0.04
Col5a2Q3U962 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Col5a2Q3U962 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Col5a2Q3U962 CT009713.8-201ENSMUST00000225448 560 ntBASIC15.3■□□□□ 0.04
Col5a2Q3U962 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col5a2Q3U962 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col5a2Q3U962 Mir219a-1-201ENSMUST00000083621 110 ntBASIC15.3■□□□□ 0.04
Col5a2Q3U962 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms