Protein–RNA interactions for Protein: Q3U435

Mmp25, Matrix metalloproteinase-25, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp25Q3U435 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Mmp25Q3U435 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Mmp25Q3U435 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Mmp25Q3U435 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Mmp25Q3U435 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.33□□□□□ -0.44
Mmp25Q3U435 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Mmp25Q3U435 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Mmp25Q3U435 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Mmp25Q3U435 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.33□□□□□ -0.44
Mmp25Q3U435 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Mmp25Q3U435 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.33□□□□□ -0.44
Mmp25Q3U435 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Mmp25Q3U435 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Mmp25Q3U435 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Mmp25Q3U435 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Mmp25Q3U435 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.33□□□□□ -0.44
Mmp25Q3U435 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Mmp25Q3U435 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Mmp25Q3U435 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Mmp25Q3U435 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Mmp25Q3U435 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Mmp25Q3U435 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Mmp25Q3U435 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Mmp25Q3U435 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Mmp25Q3U435 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Mmp25Q3U435 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Mmp25Q3U435 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Mmp25Q3U435 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Mmp25Q3U435 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.32□□□□□ -0.44
Mmp25Q3U435 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.32□□□□□ -0.44
Mmp25Q3U435 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Mmp25Q3U435 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Mmp25Q3U435 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Mmp25Q3U435 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Mmp25Q3U435 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.32□□□□□ -0.44
Mmp25Q3U435 Gm14660-201ENSMUST00000119809 575 ntBASIC12.32□□□□□ -0.44
Mmp25Q3U435 Gm16479-201ENSMUST00000121706 932 ntBASIC12.32□□□□□ -0.44
Mmp25Q3U435 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.32□□□□□ -0.44
Mmp25Q3U435 Gm26185-201ENSMUST00000157692 266 ntBASIC12.32□□□□□ -0.44
Mmp25Q3U435 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.32□□□□□ -0.44
Mmp25Q3U435 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.32□□□□□ -0.44
Mmp25Q3U435 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Mmp25Q3U435 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Mmp25Q3U435 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Mmp25Q3U435 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Mmp25Q3U435 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Mmp25Q3U435 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Mmp25Q3U435 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Mmp25Q3U435 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Mmp25Q3U435 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.32□□□□□ -0.44
Mmp25Q3U435 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Mmp25Q3U435 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Mmp25Q3U435 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Mmp25Q3U435 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Mmp25Q3U435 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Mmp25Q3U435 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Mmp25Q3U435 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Mmp25Q3U435 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Mmp25Q3U435 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Mmp25Q3U435 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Mmp25Q3U435 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.32□□□□□ -0.44
Mmp25Q3U435 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.32□□□□□ -0.44
Mmp25Q3U435 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Mmp25Q3U435 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Mmp25Q3U435 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Mmp25Q3U435 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Mmp25Q3U435 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Mmp25Q3U435 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.31□□□□□ -0.44
Mmp25Q3U435 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Mmp25Q3U435 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.31□□□□□ -0.44
Mmp25Q3U435 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Mmp25Q3U435 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Mmp25Q3U435 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Mmp25Q3U435 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.31□□□□□ -0.44
Mmp25Q3U435 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Mmp25Q3U435 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Mmp25Q3U435 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Mmp25Q3U435 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Mmp25Q3U435 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.31□□□□□ -0.44
Mmp25Q3U435 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.31□□□□□ -0.44
Mmp25Q3U435 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Mmp25Q3U435 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.31□□□□□ -0.44
Mmp25Q3U435 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Mmp25Q3U435 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.31□□□□□ -0.44
Mmp25Q3U435 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Mmp25Q3U435 Gm1335-201ENSMUST00000121653 386 ntBASIC12.31□□□□□ -0.44
Mmp25Q3U435 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.31□□□□□ -0.44
Mmp25Q3U435 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Mmp25Q3U435 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.31□□□□□ -0.44
Mmp25Q3U435 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.31□□□□□ -0.44
Mmp25Q3U435 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Mmp25Q3U435 Gm27682-201ENSMUST00000183930 110 ntBASIC12.31□□□□□ -0.44
Mmp25Q3U435 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.31□□□□□ -0.44
Mmp25Q3U435 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Mmp25Q3U435 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.31□□□□□ -0.44
Mmp25Q3U435 Gm10268-201ENSMUST00000085340 555 ntBASIC12.31□□□□□ -0.44
Mmp25Q3U435 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.31□□□□□ -0.44
Mmp25Q3U435 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Mmp25Q3U435 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Mmp25Q3U435 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms