Protein–RNA interactions for Protein: Q3SXD3

Hddc2, HD domain-containing protein 2, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hddc2Q3SXD3 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Hddc2Q3SXD3 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hddc2Q3SXD3 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hddc2Q3SXD3 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hddc2Q3SXD3 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Hddc2Q3SXD3 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hddc2Q3SXD3 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hddc2Q3SXD3 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hddc2Q3SXD3 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.15□□□□□ -0.46
Hddc2Q3SXD3 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hddc2Q3SXD3 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Hddc2Q3SXD3 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hddc2Q3SXD3 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Hddc2Q3SXD3 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.15□□□□□ -0.47
Hddc2Q3SXD3 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.15□□□□□ -0.47
Hddc2Q3SXD3 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Hddc2Q3SXD3 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC12.15□□□□□ -0.47
Hddc2Q3SXD3 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Hddc2Q3SXD3 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.14□□□□□ -0.47
Hddc2Q3SXD3 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hddc2Q3SXD3 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Hddc2Q3SXD3 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.14□□□□□ -0.47
Hddc2Q3SXD3 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Hddc2Q3SXD3 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.14□□□□□ -0.47
Hddc2Q3SXD3 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Hddc2Q3SXD3 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hddc2Q3SXD3 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hddc2Q3SXD3 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hddc2Q3SXD3 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hddc2Q3SXD3 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hddc2Q3SXD3 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Hddc2Q3SXD3 Gm12882-201ENSMUST00000121696 517 ntBASIC12.14□□□□□ -0.47
Hddc2Q3SXD3 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC12.14□□□□□ -0.47
Hddc2Q3SXD3 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Hddc2Q3SXD3 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC12.14□□□□□ -0.47
Hddc2Q3SXD3 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC12.14□□□□□ -0.47
Hddc2Q3SXD3 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC12.14□□□□□ -0.47
Hddc2Q3SXD3 AC164629.2-201ENSMUST00000217916 270 ntBASIC12.14□□□□□ -0.47
Hddc2Q3SXD3 AC154572.2-201ENSMUST00000225105 997 ntBASIC12.14□□□□□ -0.47
Hddc2Q3SXD3 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Hddc2Q3SXD3 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Hddc2Q3SXD3 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hddc2Q3SXD3 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hddc2Q3SXD3 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hddc2Q3SXD3 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hddc2Q3SXD3 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hddc2Q3SXD3 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hddc2Q3SXD3 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Hddc2Q3SXD3 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hddc2Q3SXD3 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hddc2Q3SXD3 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hddc2Q3SXD3 Gm10110-202ENSMUST00000228705 3220 ntBASIC12.13□□□□□ -0.47
Hddc2Q3SXD3 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.13□□□□□ -0.47
Hddc2Q3SXD3 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hddc2Q3SXD3 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hddc2Q3SXD3 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hddc2Q3SXD3 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hddc2Q3SXD3 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hddc2Q3SXD3 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hddc2Q3SXD3 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.13□□□□□ -0.47
Hddc2Q3SXD3 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hddc2Q3SXD3 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hddc2Q3SXD3 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC12.13□□□□□ -0.47
Hddc2Q3SXD3 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC12.13□□□□□ -0.47
Hddc2Q3SXD3 Gm11543-201ENSMUST00000120758 370 ntBASIC12.13□□□□□ -0.47
Hddc2Q3SXD3 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC12.13□□□□□ -0.47
Hddc2Q3SXD3 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.13□□□□□ -0.47
Hddc2Q3SXD3 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hddc2Q3SXD3 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC12.13□□□□□ -0.47
Hddc2Q3SXD3 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Hddc2Q3SXD3 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hddc2Q3SXD3 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.13□□□□□ -0.47
Hddc2Q3SXD3 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Hddc2Q3SXD3 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hddc2Q3SXD3 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hddc2Q3SXD3 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Hddc2Q3SXD3 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.13□□□□□ -0.47
Hddc2Q3SXD3 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.13□□□□□ -0.47
Hddc2Q3SXD3 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hddc2Q3SXD3 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hddc2Q3SXD3 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hddc2Q3SXD3 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Hddc2Q3SXD3 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hddc2Q3SXD3 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hddc2Q3SXD3 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hddc2Q3SXD3 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Hddc2Q3SXD3 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC12.12□□□□□ -0.47
Hddc2Q3SXD3 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hddc2Q3SXD3 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hddc2Q3SXD3 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.12□□□□□ -0.47
Hddc2Q3SXD3 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Hddc2Q3SXD3 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hddc2Q3SXD3 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Hddc2Q3SXD3 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hddc2Q3SXD3 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hddc2Q3SXD3 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hddc2Q3SXD3 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.12□□□□□ -0.47
Hddc2Q3SXD3 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Hddc2Q3SXD3 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hddc2Q3SXD3 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms