Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC19.65■□□□□ 0.74
Col17a1Q07563 Gm13351-201ENSMUST00000118087 414 ntBASIC19.65■□□□□ 0.74
Col17a1Q07563 Gm26134-201ENSMUST00000178484 110 ntBASIC19.65■□□□□ 0.74
Col17a1Q07563 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Col17a1Q07563 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC19.65■□□□□ 0.74
Col17a1Q07563 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC19.65■□□□□ 0.74
Col17a1Q07563 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Col17a1Q07563 AC122350.1-201ENSMUST00000228135 533 ntBASIC19.65■□□□□ 0.74
Col17a1Q07563 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col17a1Q07563 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col17a1Q07563 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col17a1Q07563 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col17a1Q07563 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Col17a1Q07563 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col17a1Q07563 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Col17a1Q07563 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Col17a1Q07563 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
Col17a1Q07563 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Col17a1Q07563 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.64■□□□□ 0.74
Col17a1Q07563 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col17a1Q07563 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col17a1Q07563 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col17a1Q07563 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col17a1Q07563 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
Col17a1Q07563 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Col17a1Q07563 Gm14942-201ENSMUST00000119642 336 ntBASIC19.64■□□□□ 0.73
Col17a1Q07563 Gm11836-201ENSMUST00000121022 441 ntBASIC19.64■□□□□ 0.73
Col17a1Q07563 Gm12291-201ENSMUST00000121627 311 ntBASIC19.64■□□□□ 0.73
Col17a1Q07563 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
Col17a1Q07563 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Col17a1Q07563 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC19.64■□□□□ 0.73
Col17a1Q07563 n-R5s185-201ENSMUST00000083953 119 ntBASIC19.64■□□□□ 0.73
Col17a1Q07563 Gm43334-201ENSMUST00000197740 1318 ntBASIC19.64■□□□□ 0.73
Col17a1Q07563 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col17a1Q07563 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col17a1Q07563 Tmed9-203ENSMUST00000224741 1450 ntBASIC19.64■□□□□ 0.73
Col17a1Q07563 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col17a1Q07563 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col17a1Q07563 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC19.63■□□□□ 0.73
Col17a1Q07563 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col17a1Q07563 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Col17a1Q07563 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col17a1Q07563 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col17a1Q07563 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Col17a1Q07563 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col17a1Q07563 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Col17a1Q07563 Gm16537-201ENSMUST00000161529 702 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Col17a1Q07563 2810049E08Rik-201ENSMUST00000185600 1102 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Col17a1Q07563 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col17a1Q07563 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Col17a1Q07563 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Col17a1Q07563 Gm37728-201ENSMUST00000195025 2292 ntBASIC19.63■□□□□ 0.73
Col17a1Q07563 Gm38344-201ENSMUST00000195306 1353 ntBASIC19.63■□□□□ 0.73
Col17a1Q07563 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col17a1Q07563 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col17a1Q07563 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col17a1Q07563 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC19.63■□□□□ 0.73
Col17a1Q07563 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col17a1Q07563 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col17a1Q07563 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col17a1Q07563 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col17a1Q07563 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col17a1Q07563 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Col17a1Q07563 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col17a1Q07563 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Col17a1Q07563 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col17a1Q07563 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col17a1Q07563 Gm13624-201ENSMUST00000120263 462 ntBASIC19.62■□□□□ 0.73
Col17a1Q07563 Gm18123-201ENSMUST00000210874 822 ntBASIC19.62■□□□□ 0.73
Col17a1Q07563 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Col17a1Q07563 AC130477.1-201ENSMUST00000226982 420 ntBASIC19.62■□□□□ 0.73
Col17a1Q07563 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col17a1Q07563 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col17a1Q07563 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col17a1Q07563 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Col17a1Q07563 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col17a1Q07563 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col17a1Q07563 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Col17a1Q07563 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col17a1Q07563 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col17a1Q07563 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Col17a1Q07563 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col17a1Q07563 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col17a1Q07563 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col17a1Q07563 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Col17a1Q07563 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col17a1Q07563 Gm13204-201ENSMUST00000120110 821 ntBASIC19.61■□□□□ 0.73
Col17a1Q07563 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col17a1Q07563 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Col17a1Q07563 Gm29808-201ENSMUST00000194419 468 ntBASIC19.61■□□□□ 0.73
Col17a1Q07563 Gm6331-201ENSMUST00000217890 450 ntBASIC19.61■□□□□ 0.73
Col17a1Q07563 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC19.61■□□□□ 0.73
Col17a1Q07563 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Col17a1Q07563 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col17a1Q07563 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col17a1Q07563 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col17a1Q07563 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col17a1Q07563 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col17a1Q07563 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Col17a1Q07563 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms