Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sox4Q06831 Gm14660-201ENSMUST00000119809 575 ntBASIC12.89□□□□□ -0.35
Sox4Q06831 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.89□□□□□ -0.35
Sox4Q06831 Gm45784-201ENSMUST00000188360 142 ntBASIC12.89□□□□□ -0.35
Sox4Q06831 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.89□□□□□ -0.35
Sox4Q06831 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.89□□□□□ -0.35
Sox4Q06831 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox4Q06831 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox4Q06831 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox4Q06831 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox4Q06831 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox4Q06831 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Sox4Q06831 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Sox4Q06831 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox4Q06831 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox4Q06831 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Sox4Q06831 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.89□□□□□ -0.35
Sox4Q06831 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sox4Q06831 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox4Q06831 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sox4Q06831 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox4Q06831 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox4Q06831 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Sox4Q06831 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Sox4Q06831 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sox4Q06831 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox4Q06831 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox4Q06831 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox4Q06831 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox4Q06831 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Sox4Q06831 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox4Q06831 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox4Q06831 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox4Q06831 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sox4Q06831 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox4Q06831 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.88□□□□□ -0.35
Sox4Q06831 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sox4Q06831 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
Sox4Q06831 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox4Q06831 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Sox4Q06831 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.88□□□□□ -0.35
Sox4Q06831 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Sox4Q06831 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.88□□□□□ -0.35
Sox4Q06831 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox4Q06831 Gm19931-201ENSMUST00000198920 368 ntBASIC12.88□□□□□ -0.35
Sox4Q06831 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.88□□□□□ -0.35
Sox4Q06831 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Sox4Q06831 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sox4Q06831 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox4Q06831 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox4Q06831 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox4Q06831 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox4Q06831 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox4Q06831 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Sox4Q06831 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Sox4Q06831 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox4Q06831 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox4Q06831 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox4Q06831 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sox4Q06831 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox4Q06831 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox4Q06831 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Sox4Q06831 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sox4Q06831 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Sox4Q06831 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Sox4Q06831 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox4Q06831 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Sox4Q06831 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sox4Q06831 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Sox4Q06831 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sox4Q06831 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Sox4Q06831 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Sox4Q06831 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.87□□□□□ -0.35
Sox4Q06831 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.87□□□□□ -0.35
Sox4Q06831 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox4Q06831 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox4Q06831 Gm16479-201ENSMUST00000121706 932 ntBASIC12.87□□□□□ -0.35
Sox4Q06831 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox4Q06831 Gm27682-201ENSMUST00000183930 110 ntBASIC12.87□□□□□ -0.35
Sox4Q06831 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.87□□□□□ -0.35
Sox4Q06831 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sox4Q06831 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.87□□□□□ -0.35
Sox4Q06831 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox4Q06831 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.87□□□□□ -0.35
Sox4Q06831 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Sox4Q06831 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Sox4Q06831 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sox4Q06831 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox4Q06831 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox4Q06831 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Sox4Q06831 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.87□□□□□ -0.35
Sox4Q06831 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Sox4Q06831 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox4Q06831 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox4Q06831 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox4Q06831 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Sox4Q06831 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox4Q06831 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sox4Q06831 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Sox4Q06831 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms