Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sox9Q04887 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox9Q04887 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Sox9Q04887 Gm13296-201ENSMUST00000117854 997 ntBASIC13.5□□□□□ -0.25
Sox9Q04887 Gm45224-201ENSMUST00000208203 414 ntBASIC13.5□□□□□ -0.25
Sox9Q04887 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC13.5□□□□□ -0.25
Sox9Q04887 AC159819.2-201ENSMUST00000216151 342 ntBASIC13.5□□□□□ -0.25
Sox9Q04887 Gm10752-201ENSMUST00000218348 729 ntBASIC13.5□□□□□ -0.25
Sox9Q04887 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox9Q04887 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sox9Q04887 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC13.5□□□□□ -0.25
Sox9Q04887 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Sox9Q04887 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Sox9Q04887 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sox9Q04887 Gm45495-201ENSMUST00000200940 1700 ntBASIC13.5□□□□□ -0.25
Sox9Q04887 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sox9Q04887 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox9Q04887 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox9Q04887 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox9Q04887 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sox9Q04887 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox9Q04887 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox9Q04887 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.49□□□□□ -0.25
Sox9Q04887 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox9Q04887 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox9Q04887 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox9Q04887 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Sox9Q04887 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
Sox9Q04887 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sox9Q04887 Gm24749-201ENSMUST00000157838 343 ntBASIC13.49□□□□□ -0.25
Sox9Q04887 Gm18734-201ENSMUST00000172937 808 ntBASIC13.49□□□□□ -0.25
Sox9Q04887 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC13.49□□□□□ -0.25
Sox9Q04887 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC13.49□□□□□ -0.25
Sox9Q04887 Gm8285-201ENSMUST00000208293 759 ntBASIC13.49□□□□□ -0.25
Sox9Q04887 Gm7600-201ENSMUST00000209657 785 ntBASIC13.49□□□□□ -0.25
Sox9Q04887 AC135469.1-201ENSMUST00000225984 772 ntBASIC13.49□□□□□ -0.25
Sox9Q04887 AC113031.8-201ENSMUST00000227856 631 ntBASIC13.49□□□□□ -0.25
Sox9Q04887 AC159103.1-201ENSMUST00000228325 429 ntBASIC13.49□□□□□ -0.25
Sox9Q04887 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox9Q04887 Gm10179-201ENSMUST00000086233 688 ntBASIC13.49□□□□□ -0.25
Sox9Q04887 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Sox9Q04887 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox9Q04887 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Sox9Q04887 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox9Q04887 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox9Q04887 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.49□□□□□ -0.25
Sox9Q04887 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox9Q04887 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Sox9Q04887 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox9Q04887 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Sox9Q04887 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sox9Q04887 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox9Q04887 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox9Q04887 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox9Q04887 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC13.48□□□□□ -0.25
Sox9Q04887 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.48□□□□□ -0.25
Sox9Q04887 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox9Q04887 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sox9Q04887 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox9Q04887 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox9Q04887 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.48□□□□□ -0.25
Sox9Q04887 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox9Q04887 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox9Q04887 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox9Q04887 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox9Q04887 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox9Q04887 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox9Q04887 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox9Q04887 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox9Q04887 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.48□□□□□ -0.25
Sox9Q04887 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox9Q04887 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox9Q04887 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sox9Q04887 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC13.48□□□□□ -0.25
Sox9Q04887 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC13.48□□□□□ -0.25
Sox9Q04887 Gm9555-201ENSMUST00000200908 583 ntBASIC13.48□□□□□ -0.25
Sox9Q04887 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sox9Q04887 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sox9Q04887 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC13.48□□□□□ -0.25
Sox9Q04887 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox9Q04887 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Sox9Q04887 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox9Q04887 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox9Q04887 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.48□□□□□ -0.25
Sox9Q04887 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
Sox9Q04887 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC13.48□□□□□ -0.25
Sox9Q04887 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox9Q04887 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Sox9Q04887 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox9Q04887 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox9Q04887 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox9Q04887 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox9Q04887 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox9Q04887 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox9Q04887 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox9Q04887 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.48□□□□□ -0.25
Sox9Q04887 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox9Q04887 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox9Q04887 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox9Q04887 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms