Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Col8a1Q00780 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC11.2□□□□□ -0.62
Col8a1Q00780 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col8a1Q00780 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col8a1Q00780 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Col8a1Q00780 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Col8a1Q00780 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col8a1Q00780 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col8a1Q00780 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col8a1Q00780 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col8a1Q00780 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col8a1Q00780 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col8a1Q00780 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Col8a1Q00780 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col8a1Q00780 Gm20632-201ENSMUST00000176760 2427 ntBASIC11.19□□□□□ -0.62
Col8a1Q00780 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col8a1Q00780 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col8a1Q00780 Gm44981-201ENSMUST00000205549 1943 ntBASIC11.19□□□□□ -0.62
Col8a1Q00780 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC11.19□□□□□ -0.62
Col8a1Q00780 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col8a1Q00780 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col8a1Q00780 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Col8a1Q00780 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col8a1Q00780 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Col8a1Q00780 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC11.19□□□□□ -0.62
Col8a1Q00780 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col8a1Q00780 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col8a1Q00780 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col8a1Q00780 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col8a1Q00780 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Col8a1Q00780 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC11.19□□□□□ -0.62
Col8a1Q00780 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col8a1Q00780 n-R5s14-201ENSMUST00000122688 107 ntBASIC11.19□□□□□ -0.62
Col8a1Q00780 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Col8a1Q00780 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC11.19□□□□□ -0.62
Col8a1Q00780 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.19□□□□□ -0.62
Col8a1Q00780 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC11.19□□□□□ -0.62
Col8a1Q00780 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col8a1Q00780 Gm25732-201ENSMUST00000175168 60 ntBASIC11.19□□□□□ -0.62
Col8a1Q00780 Gm28450-201ENSMUST00000187349 638 ntBASIC11.19□□□□□ -0.62
Col8a1Q00780 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Col8a1Q00780 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Col8a1Q00780 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC11.19□□□□□ -0.62
Col8a1Q00780 AC154680.1-201ENSMUST00000224376 859 ntBASIC11.19□□□□□ -0.62
Col8a1Q00780 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col8a1Q00780 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC11.19□□□□□ -0.62
Col8a1Q00780 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col8a1Q00780 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col8a1Q00780 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col8a1Q00780 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col8a1Q00780 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC11.19□□□□□ -0.62
Col8a1Q00780 Gm43423-201ENSMUST00000198390 2094 ntBASIC11.19□□□□□ -0.62
Col8a1Q00780 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col8a1Q00780 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col8a1Q00780 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col8a1Q00780 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col8a1Q00780 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col8a1Q00780 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col8a1Q00780 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col8a1Q00780 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Col8a1Q00780 AC139054.1-201ENSMUST00000226898 1598 ntBASIC11.19□□□□□ -0.62
Col8a1Q00780 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col8a1Q00780 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col8a1Q00780 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col8a1Q00780 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col8a1Q00780 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col8a1Q00780 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col8a1Q00780 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC11.19□□□□□ -0.62
Col8a1Q00780 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
Col8a1Q00780 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col8a1Q00780 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Col8a1Q00780 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC11.18□□□□□ -0.62
Col8a1Q00780 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC11.18□□□□□ -0.62
Col8a1Q00780 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col8a1Q00780 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col8a1Q00780 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col8a1Q00780 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col8a1Q00780 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC11.18□□□□□ -0.62
Col8a1Q00780 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Col8a1Q00780 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col8a1Q00780 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col8a1Q00780 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col8a1Q00780 Gm45630-201ENSMUST00000210243 1911 ntBASIC11.18□□□□□ -0.62
Col8a1Q00780 Gm14130-201ENSMUST00000118417 987 ntBASIC11.18□□□□□ -0.62
Col8a1Q00780 Gm9083-201ENSMUST00000120423 819 ntBASIC11.18□□□□□ -0.62
Col8a1Q00780 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC11.18□□□□□ -0.62
Col8a1Q00780 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC11.18□□□□□ -0.62
Col8a1Q00780 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC11.18□□□□□ -0.62
Col8a1Q00780 Gm26956-201ENSMUST00000182176 986 ntBASIC11.18□□□□□ -0.62
Col8a1Q00780 Gm43378-201ENSMUST00000199336 582 ntBASIC11.18□□□□□ -0.62
Col8a1Q00780 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Col8a1Q00780 AC141438.2-201ENSMUST00000215068 271 ntBASIC11.18□□□□□ -0.62
Col8a1Q00780 AC131997.1-201ENSMUST00000228611 1229 ntBASIC11.18□□□□□ -0.62
Col8a1Q00780 AC135114.1-201ENSMUST00000228682 270 ntBASIC11.18□□□□□ -0.62
Col8a1Q00780 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col8a1Q00780 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Col8a1Q00780 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC11.18□□□□□ -0.62
Col8a1Q00780 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col8a1Q00780 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC11.18□□□□□ -0.62
Col8a1Q00780 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms