Protein–RNA interactions for Protein: P70671

Irf3, Interferon regulatory factor 3, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf3P70671 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Irf3P70671 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Irf3P70671 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Irf3P70671 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Irf3P70671 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Irf3P70671 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Irf3P70671 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Irf3P70671 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Irf3P70671 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Irf3P70671 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Irf3P70671 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Irf3P70671 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Irf3P70671 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Irf3P70671 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC14.16□□□□□ -0.14
Irf3P70671 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Irf3P70671 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC14.16□□□□□ -0.14
Irf3P70671 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC14.16□□□□□ -0.14
Irf3P70671 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC14.16□□□□□ -0.14
Irf3P70671 Gm18916-201ENSMUST00000198264 1246 ntBASIC14.16□□□□□ -0.14
Irf3P70671 Gm44364-201ENSMUST00000198368 141 ntBASIC14.16□□□□□ -0.14
Irf3P70671 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Irf3P70671 Gm21769-201ENSMUST00000211922 111 ntBASIC14.16□□□□□ -0.14
Irf3P70671 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC14.16□□□□□ -0.14
Irf3P70671 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Irf3P70671 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Irf3P70671 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Irf3P70671 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Irf3P70671 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.16□□□□□ -0.14
Irf3P70671 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Irf3P70671 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Irf3P70671 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Irf3P70671 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Irf3P70671 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Irf3P70671 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Irf3P70671 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Irf3P70671 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Irf3P70671 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Irf3P70671 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Irf3P70671 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Irf3P70671 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Irf3P70671 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Irf3P70671 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Irf3P70671 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Irf3P70671 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Irf3P70671 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Irf3P70671 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Irf3P70671 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Irf3P70671 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Irf3P70671 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC14.15□□□□□ -0.14
Irf3P70671 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Irf3P70671 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Irf3P70671 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC14.15□□□□□ -0.14
Irf3P70671 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC14.15□□□□□ -0.14
Irf3P70671 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC14.15□□□□□ -0.14
Irf3P70671 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Irf3P70671 Gm6652-201ENSMUST00000186414 1070 ntBASIC14.15□□□□□ -0.14
Irf3P70671 Gm6621-201ENSMUST00000193251 772 ntBASIC14.15□□□□□ -0.14
Irf3P70671 Gm38341-201ENSMUST00000195357 515 ntBASIC14.15□□□□□ -0.14
Irf3P70671 AC132384.14-201ENSMUST00000219346 1147 ntBASIC14.15□□□□□ -0.14
Irf3P70671 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Irf3P70671 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC14.15□□□□□ -0.14
Irf3P70671 Mir339-201ENSMUST00000083659 96 ntBASIC14.15□□□□□ -0.14
Irf3P70671 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Irf3P70671 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.15□□□□□ -0.14
Irf3P70671 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Irf3P70671 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Irf3P70671 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Irf3P70671 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Irf3P70671 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Irf3P70671 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Irf3P70671 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Irf3P70671 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Irf3P70671 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC14.15□□□□□ -0.15
Irf3P70671 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Irf3P70671 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC14.14□□□□□ -0.15
Irf3P70671 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Irf3P70671 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Irf3P70671 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Irf3P70671 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Irf3P70671 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Irf3P70671 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC14.14□□□□□ -0.15
Irf3P70671 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Irf3P70671 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Irf3P70671 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Irf3P70671 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Irf3P70671 Gm11222-201ENSMUST00000119005 738 ntBASIC14.14□□□□□ -0.15
Irf3P70671 Gm11964-201ENSMUST00000120982 444 ntBASIC14.14□□□□□ -0.15
Irf3P70671 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Irf3P70671 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Irf3P70671 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Irf3P70671 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Irf3P70671 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Irf3P70671 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Irf3P70671 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Irf3P70671 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Irf3P70671 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Irf3P70671 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Irf3P70671 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Irf3P70671 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Irf3P70671 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms