Protein–RNA interactions for Protein: P70340

Smad1, Mothers against decapentaplegic homolog 1, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad1P70340 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Smad1P70340 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smad1P70340 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smad1P70340 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Smad1P70340 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
Smad1P70340 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smad1P70340 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Smad1P70340 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.24
Smad1P70340 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Smad1P70340 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Smad1P70340 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.52□□□□□ -0.24
Smad1P70340 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Smad1P70340 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Smad1P70340 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smad1P70340 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC13.52□□□□□ -0.25
Smad1P70340 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC13.52□□□□□ -0.25
Smad1P70340 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Smad1P70340 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.52□□□□□ -0.25
Smad1P70340 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Smad1P70340 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Smad1P70340 Gm5279-201ENSMUST00000199575 745 ntBASIC13.52□□□□□ -0.25
Smad1P70340 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.52□□□□□ -0.25
Smad1P70340 Gm18307-201ENSMUST00000206864 949 ntBASIC13.52□□□□□ -0.25
Smad1P70340 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC13.52□□□□□ -0.25
Smad1P70340 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smad1P70340 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smad1P70340 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smad1P70340 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Smad1P70340 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smad1P70340 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Smad1P70340 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smad1P70340 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smad1P70340 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Smad1P70340 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smad1P70340 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.52□□□□□ -0.25
Smad1P70340 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smad1P70340 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smad1P70340 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smad1P70340 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Smad1P70340 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smad1P70340 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.51□□□□□ -0.25
Smad1P70340 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smad1P70340 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Smad1P70340 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Smad1P70340 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Smad1P70340 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Smad1P70340 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.51□□□□□ -0.25
Smad1P70340 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Smad1P70340 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smad1P70340 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smad1P70340 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Smad1P70340 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Smad1P70340 Trav4d-2-201ENSMUST00000120914 335 ntBASIC13.51□□□□□ -0.25
Smad1P70340 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Smad1P70340 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.51□□□□□ -0.25
Smad1P70340 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.51□□□□□ -0.25
Smad1P70340 Gm27839-201ENSMUST00000184242 106 ntBASIC13.51□□□□□ -0.25
Smad1P70340 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Smad1P70340 Gm18905-201ENSMUST00000205454 928 ntBASIC13.51□□□□□ -0.25
Smad1P70340 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.51□□□□□ -0.25
Smad1P70340 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smad1P70340 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smad1P70340 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Smad1P70340 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Smad1P70340 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Smad1P70340 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smad1P70340 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.51□□□□□ -0.25
Smad1P70340 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Smad1P70340 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.51□□□□□ -0.25
Smad1P70340 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Smad1P70340 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smad1P70340 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smad1P70340 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Smad1P70340 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smad1P70340 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smad1P70340 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.5□□□□□ -0.25
Smad1P70340 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smad1P70340 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Smad1P70340 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smad1P70340 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smad1P70340 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Smad1P70340 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smad1P70340 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Smad1P70340 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smad1P70340 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.5□□□□□ -0.25
Smad1P70340 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smad1P70340 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smad1P70340 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Smad1P70340 Gm13226-201ENSMUST00000117838 404 ntBASIC13.5□□□□□ -0.25
Smad1P70340 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Smad1P70340 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC13.5□□□□□ -0.25
Smad1P70340 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Smad1P70340 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Smad1P70340 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Smad1P70340 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smad1P70340 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smad1P70340 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smad1P70340 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Smad1P70340 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smad1P70340 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms