Protein–RNA interactions for Protein: P61759

Vbp1, Prefoldin subunit 3, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vbp1P61759 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.87□□□□□ -0.51
Vbp1P61759 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vbp1P61759 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vbp1P61759 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Vbp1P61759 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vbp1P61759 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vbp1P61759 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Vbp1P61759 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vbp1P61759 Gm45667-201ENSMUST00000210380 1316 ntBASIC11.86□□□□□ -0.51
Vbp1P61759 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Vbp1P61759 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Vbp1P61759 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vbp1P61759 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Vbp1P61759 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vbp1P61759 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vbp1P61759 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vbp1P61759 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.86□□□□□ -0.51
Vbp1P61759 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vbp1P61759 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vbp1P61759 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vbp1P61759 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vbp1P61759 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vbp1P61759 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Vbp1P61759 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vbp1P61759 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC11.86□□□□□ -0.51
Vbp1P61759 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC11.86□□□□□ -0.51
Vbp1P61759 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Vbp1P61759 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Vbp1P61759 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vbp1P61759 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vbp1P61759 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Vbp1P61759 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vbp1P61759 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vbp1P61759 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vbp1P61759 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Vbp1P61759 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vbp1P61759 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.86□□□□□ -0.51
Vbp1P61759 Map1b-203ENSMUST00000223725 2669 ntBASIC11.86□□□□□ -0.51
Vbp1P61759 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vbp1P61759 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vbp1P61759 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vbp1P61759 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.86□□□□□ -0.51
Vbp1P61759 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vbp1P61759 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.86□□□□□ -0.51
Vbp1P61759 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vbp1P61759 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vbp1P61759 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vbp1P61759 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Vbp1P61759 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vbp1P61759 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Vbp1P61759 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vbp1P61759 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vbp1P61759 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vbp1P61759 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Vbp1P61759 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Vbp1P61759 AC154404.1-201ENSMUST00000223601 2077 ntBASIC11.85□□□□□ -0.51
Vbp1P61759 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vbp1P61759 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vbp1P61759 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Vbp1P61759 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Vbp1P61759 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vbp1P61759 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vbp1P61759 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Vbp1P61759 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vbp1P61759 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vbp1P61759 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Vbp1P61759 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC11.85□□□□□ -0.51
Vbp1P61759 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Vbp1P61759 Gm6539-201ENSMUST00000119157 1064 ntBASIC11.85□□□□□ -0.51
Vbp1P61759 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Vbp1P61759 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC11.85□□□□□ -0.51
Vbp1P61759 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Vbp1P61759 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Vbp1P61759 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Vbp1P61759 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Vbp1P61759 Gm27459-201ENSMUST00000184860 107 ntBASIC11.85□□□□□ -0.51
Vbp1P61759 AC084391.1-201ENSMUST00000200651 141 ntBASIC11.85□□□□□ -0.51
Vbp1P61759 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC11.85□□□□□ -0.51
Vbp1P61759 Gm10060-201ENSMUST00000212002 111 ntBASIC11.85□□□□□ -0.51
Vbp1P61759 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vbp1P61759 AC158529.1-201ENSMUST00000223618 239 ntBASIC11.85□□□□□ -0.51
Vbp1P61759 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC11.85□□□□□ -0.51
Vbp1P61759 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vbp1P61759 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vbp1P61759 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vbp1P61759 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vbp1P61759 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Vbp1P61759 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Vbp1P61759 Mir125a-201ENSMUST00000083545 68 ntBASIC11.85□□□□□ -0.51
Vbp1P61759 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Vbp1P61759 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Vbp1P61759 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vbp1P61759 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Vbp1P61759 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.85□□□□□ -0.51
Vbp1P61759 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Vbp1P61759 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Vbp1P61759 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vbp1P61759 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vbp1P61759 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Vbp1P61759 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms