Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Abcd3P55096 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Abcd3P55096 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Abcd3P55096 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Abcd3P55096 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Abcd3P55096 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Abcd3P55096 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Abcd3P55096 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Abcd3P55096 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Abcd3P55096 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Abcd3P55096 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC11.73□□□□□ -0.53
Abcd3P55096 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Abcd3P55096 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Abcd3P55096 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Abcd3P55096 Gm15544-201ENSMUST00000118776 1531 ntBASIC11.73□□□□□ -0.53
Abcd3P55096 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC11.73□□□□□ -0.53
Abcd3P55096 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Abcd3P55096 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Abcd3P55096 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Abcd3P55096 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Abcd3P55096 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC11.73□□□□□ -0.53
Abcd3P55096 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Abcd3P55096 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC11.73□□□□□ -0.53
Abcd3P55096 AC122305.4-201ENSMUST00000216159 1206 ntBASIC11.73□□□□□ -0.53
Abcd3P55096 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC11.73□□□□□ -0.53
Abcd3P55096 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Abcd3P55096 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Abcd3P55096 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Abcd3P55096 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Abcd3P55096 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Abcd3P55096 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Abcd3P55096 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Abcd3P55096 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Abcd3P55096 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Abcd3P55096 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Abcd3P55096 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Abcd3P55096 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Abcd3P55096 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC11.73□□□□□ -0.53
Abcd3P55096 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Abcd3P55096 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Abcd3P55096 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Abcd3P55096 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Abcd3P55096 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Abcd3P55096 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Abcd3P55096 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Abcd3P55096 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Abcd3P55096 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Abcd3P55096 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.72□□□□□ -0.53
Abcd3P55096 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Abcd3P55096 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Abcd3P55096 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Abcd3P55096 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Abcd3P55096 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Abcd3P55096 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Abcd3P55096 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Abcd3P55096 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Abcd3P55096 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Abcd3P55096 Gm16202-201ENSMUST00000117532 544 ntBASIC11.72□□□□□ -0.53
Abcd3P55096 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC11.72□□□□□ -0.53
Abcd3P55096 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Abcd3P55096 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Abcd3P55096 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Abcd3P55096 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC11.72□□□□□ -0.53
Abcd3P55096 Gm42929-201ENSMUST00000198374 1286 ntBASIC11.72□□□□□ -0.53
Abcd3P55096 Gm44069-201ENSMUST00000204898 506 ntBASIC11.72□□□□□ -0.53
Abcd3P55096 Gm44064-201ENSMUST00000204964 1087 ntBASIC11.72□□□□□ -0.53
Abcd3P55096 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Abcd3P55096 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC11.72□□□□□ -0.53
Abcd3P55096 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Abcd3P55096 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Abcd3P55096 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Abcd3P55096 AC154747.3-201ENSMUST00000224471 3470 ntBASIC11.72□□□□□ -0.53
Abcd3P55096 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Abcd3P55096 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Abcd3P55096 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Abcd3P55096 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Abcd3P55096 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Abcd3P55096 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Abcd3P55096 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Abcd3P55096 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Abcd3P55096 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
Abcd3P55096 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Abcd3P55096 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Abcd3P55096 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Abcd3P55096 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Abcd3P55096 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Abcd3P55096 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Abcd3P55096 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Abcd3P55096 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Abcd3P55096 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Abcd3P55096 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC11.71□□□□□ -0.53
Abcd3P55096 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Abcd3P55096 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Abcd3P55096 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Abcd3P55096 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Abcd3P55096 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Abcd3P55096 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Abcd3P55096 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC11.71□□□□□ -0.53
Abcd3P55096 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Abcd3P55096 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms