Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atxn1P54254 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Atxn1P54254 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atxn1P54254 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atxn1P54254 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atxn1P54254 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atxn1P54254 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atxn1P54254 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atxn1P54254 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atxn1P54254 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Atxn1P54254 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atxn1P54254 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atxn1P54254 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atxn1P54254 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atxn1P54254 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Atxn1P54254 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atxn1P54254 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.01□□□□□ -0.33
Atxn1P54254 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atxn1P54254 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atxn1P54254 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Atxn1P54254 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC13.01□□□□□ -0.33
Atxn1P54254 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atxn1P54254 Gm12012-201ENSMUST00000118857 1066 ntBASIC13.01□□□□□ -0.33
Atxn1P54254 Gm12217-201ENSMUST00000118858 696 ntBASIC13.01□□□□□ -0.33
Atxn1P54254 Gm9431-201ENSMUST00000119765 1051 ntBASIC13.01□□□□□ -0.33
Atxn1P54254 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Atxn1P54254 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Atxn1P54254 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Atxn1P54254 Gm7809-201ENSMUST00000153199 742 ntBASIC13.01□□□□□ -0.33
Atxn1P54254 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Atxn1P54254 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Atxn1P54254 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Atxn1P54254 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC13.01□□□□□ -0.33
Atxn1P54254 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Atxn1P54254 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC13.01□□□□□ -0.33
Atxn1P54254 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Atxn1P54254 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.01□□□□□ -0.33
Atxn1P54254 Morn2-202ENSMUST00000227729 656 ntBASIC13.01□□□□□ -0.33
Atxn1P54254 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atxn1P54254 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atxn1P54254 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atxn1P54254 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atxn1P54254 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atxn1P54254 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.01□□□□□ -0.33
Atxn1P54254 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atxn1P54254 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Atxn1P54254 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atxn1P54254 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Atxn1P54254 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atxn1P54254 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atxn1P54254 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atxn1P54254 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atxn1P54254 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Atxn1P54254 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atxn1P54254 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atxn1P54254 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atxn1P54254 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Atxn1P54254 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Atxn1P54254 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Atxn1P54254 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Atxn1P54254 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Atxn1P54254 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13□□□□□ -0.33
Atxn1P54254 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Atxn1P54254 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13□□□□□ -0.33
Atxn1P54254 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Atxn1P54254 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13□□□□□ -0.33
Atxn1P54254 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13□□□□□ -0.33
Atxn1P54254 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Atxn1P54254 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Atxn1P54254 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Atxn1P54254 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC13□□□□□ -0.33
Atxn1P54254 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Atxn1P54254 Gm9109-201ENSMUST00000120254 1405 ntBASIC13□□□□□ -0.33
Atxn1P54254 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Atxn1P54254 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13□□□□□ -0.33
Atxn1P54254 Gm9755-201ENSMUST00000032981 1356 ntBASIC13□□□□□ -0.33
Atxn1P54254 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Atxn1P54254 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Atxn1P54254 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Atxn1P54254 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Atxn1P54254 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC13□□□□□ -0.33
Atxn1P54254 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Atxn1P54254 Mir6927-201ENSMUST00000184494 71 ntBASIC13□□□□□ -0.33
Atxn1P54254 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC13□□□□□ -0.33
Atxn1P54254 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13□□□□□ -0.33
Atxn1P54254 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC13□□□□□ -0.33
Atxn1P54254 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Atxn1P54254 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Atxn1P54254 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Atxn1P54254 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Atxn1P54254 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Atxn1P54254 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13□□□□□ -0.33
Atxn1P54254 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Atxn1P54254 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Atxn1P54254 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Atxn1P54254 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Atxn1P54254 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Atxn1P54254 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Atxn1P54254 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Atxn1P54254 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms