Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm43692-201ENSMUST00000198236 1062 ntBASIC13.32□□□□□ -0.28
Sox1P53783 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC13.32□□□□□ -0.28
Sox1P53783 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sox1P53783 Gm9463-201ENSMUST00000206707 601 ntBASIC13.32□□□□□ -0.28
Sox1P53783 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.32□□□□□ -0.28
Sox1P53783 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox1P53783 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC13.32□□□□□ -0.28
Sox1P53783 Gm10312-201ENSMUST00000078515 489 ntBASIC13.32□□□□□ -0.28
Sox1P53783 Gm22058-201ENSMUST00000083393 310 ntBASIC13.32□□□□□ -0.28
Sox1P53783 Gm25007-201ENSMUST00000083808 133 ntBASIC13.32□□□□□ -0.28
Sox1P53783 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox1P53783 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Sox1P53783 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Sox1P53783 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.32□□□□□ -0.28
Sox1P53783 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.32□□□□□ -0.28
Sox1P53783 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sox1P53783 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sox1P53783 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
Sox1P53783 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox1P53783 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Sox1P53783 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Sox1P53783 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox1P53783 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Sox1P53783 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sox1P53783 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox1P53783 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox1P53783 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
Sox1P53783 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox1P53783 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox1P53783 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox1P53783 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sox1P53783 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox1P53783 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox1P53783 Daam2-202ENSMUST00000224595 1926 ntBASIC13.31□□□□□ -0.28
Sox1P53783 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox1P53783 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox1P53783 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Sox1P53783 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.31□□□□□ -0.28
Sox1P53783 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox1P53783 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox1P53783 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Sox1P53783 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox1P53783 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox1P53783 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox1P53783 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Sox1P53783 Gm13600-201ENSMUST00000117949 744 ntBASIC13.31□□□□□ -0.28
Sox1P53783 Mir1901-201ENSMUST00000122616 78 ntBASIC13.31□□□□□ -0.28
Sox1P53783 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sox1P53783 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sox1P53783 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sox1P53783 Gm5621-201ENSMUST00000187303 640 ntBASIC13.31□□□□□ -0.28
Sox1P53783 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sox1P53783 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Sox1P53783 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC13.31□□□□□ -0.28
Sox1P53783 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Sox1P53783 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sox1P53783 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox1P53783 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox1P53783 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox1P53783 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Sox1P53783 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Sox1P53783 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox1P53783 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Sox1P53783 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox1P53783 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sox1P53783 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox1P53783 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox1P53783 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox1P53783 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Sox1P53783 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sox1P53783 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC13.3□□□□□ -0.28
Sox1P53783 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox1P53783 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox1P53783 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox1P53783 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox1P53783 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox1P53783 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC13.3□□□□□ -0.28
Sox1P53783 Gm13035-201ENSMUST00000117496 342 ntBASIC13.3□□□□□ -0.28
Sox1P53783 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC13.3□□□□□ -0.28
Sox1P53783 Gm6963-201ENSMUST00000147879 379 ntBASIC13.3□□□□□ -0.28
Sox1P53783 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC13.3□□□□□ -0.28
Sox1P53783 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Sox1P53783 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox1P53783 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sox1P53783 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC13.3□□□□□ -0.28
Sox1P53783 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sox1P53783 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC13.3□□□□□ -0.28
Sox1P53783 Gm18558-201ENSMUST00000186253 1214 ntBASIC13.3□□□□□ -0.28
Sox1P53783 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sox1P53783 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sox1P53783 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Sox1P53783 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sox1P53783 Mt1-202ENSMUST00000211807 1085 ntBASIC13.3□□□□□ -0.28
Sox1P53783 Aprt-ps-201ENSMUST00000212311 505 ntBASIC13.3□□□□□ -0.28
Sox1P53783 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox1P53783 CT485607.1-201ENSMUST00000216100 85 ntBASIC13.3□□□□□ -0.28
Sox1P53783 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sox1P53783 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox1P53783 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox1P53783 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms