Protein–RNA interactions for Protein: P50446

Krt6a, Keratin, type II cytoskeletal 6A, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt6aP50446 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Krt6aP50446 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.01□□□□□ -0.33
Krt6aP50446 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.01□□□□□ -0.33
Krt6aP50446 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.01□□□□□ -0.33
Krt6aP50446 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Krt6aP50446 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Krt6aP50446 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.01□□□□□ -0.33
Krt6aP50446 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Krt6aP50446 Gm11524-201ENSMUST00000119349 807 ntBASIC13.01□□□□□ -0.33
Krt6aP50446 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.01□□□□□ -0.33
Krt6aP50446 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Krt6aP50446 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Krt6aP50446 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.01□□□□□ -0.33
Krt6aP50446 Gm19078-201ENSMUST00000206311 727 ntBASIC13.01□□□□□ -0.33
Krt6aP50446 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.01□□□□□ -0.33
Krt6aP50446 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.01□□□□□ -0.33
Krt6aP50446 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Krt6aP50446 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Krt6aP50446 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Krt6aP50446 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Krt6aP50446 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Krt6aP50446 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.01□□□□□ -0.33
Krt6aP50446 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Krt6aP50446 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Krt6aP50446 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Krt6aP50446 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.01□□□□□ -0.33
Krt6aP50446 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Krt6aP50446 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Krt6aP50446 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Krt6aP50446 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Krt6aP50446 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Krt6aP50446 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Krt6aP50446 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Krt6aP50446 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13□□□□□ -0.33
Krt6aP50446 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13□□□□□ -0.33
Krt6aP50446 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Krt6aP50446 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Krt6aP50446 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Krt6aP50446 Rubie-203ENSMUST00000227803 2430 ntBASIC13□□□□□ -0.33
Krt6aP50446 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13□□□□□ -0.33
Krt6aP50446 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13□□□□□ -0.33
Krt6aP50446 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13□□□□□ -0.33
Krt6aP50446 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13□□□□□ -0.33
Krt6aP50446 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Krt6aP50446 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Krt6aP50446 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Krt6aP50446 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13□□□□□ -0.33
Krt6aP50446 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13□□□□□ -0.33
Krt6aP50446 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Krt6aP50446 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Krt6aP50446 Gm15376-201ENSMUST00000122258 783 ntBASIC13□□□□□ -0.33
Krt6aP50446 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13□□□□□ -0.33
Krt6aP50446 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC13□□□□□ -0.33
Krt6aP50446 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13□□□□□ -0.33
Krt6aP50446 Gm27306-201ENSMUST00000183970 107 ntBASIC13□□□□□ -0.33
Krt6aP50446 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13□□□□□ -0.33
Krt6aP50446 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13□□□□□ -0.33
Krt6aP50446 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13□□□□□ -0.33
Krt6aP50446 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Krt6aP50446 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Krt6aP50446 Gm20445-201ENSMUST00000061905 565 ntBASIC13□□□□□ -0.33
Krt6aP50446 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Krt6aP50446 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13□□□□□ -0.33
Krt6aP50446 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Krt6aP50446 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Krt6aP50446 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Krt6aP50446 Gm42829-201ENSMUST00000198417 2585 ntBASIC13□□□□□ -0.33
Krt6aP50446 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Krt6aP50446 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Krt6aP50446 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Krt6aP50446 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Krt6aP50446 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Krt6aP50446 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Krt6aP50446 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Krt6aP50446 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Krt6aP50446 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Krt6aP50446 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Krt6aP50446 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.99□□□□□ -0.33
Krt6aP50446 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Krt6aP50446 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Krt6aP50446 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Krt6aP50446 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Krt6aP50446 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Krt6aP50446 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Krt6aP50446 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Krt6aP50446 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Krt6aP50446 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Krt6aP50446 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Krt6aP50446 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.99□□□□□ -0.33
Krt6aP50446 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Krt6aP50446 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Krt6aP50446 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Krt6aP50446 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Krt6aP50446 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Krt6aP50446 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Krt6aP50446 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.99□□□□□ -0.33
Krt6aP50446 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Krt6aP50446 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Krt6aP50446 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.99□□□□□ -0.33
Krt6aP50446 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms