Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
GdnfP48540 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
GdnfP48540 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
GdnfP48540 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
GdnfP48540 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
GdnfP48540 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
GdnfP48540 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
GdnfP48540 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
GdnfP48540 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
GdnfP48540 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
GdnfP48540 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
GdnfP48540 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
GdnfP48540 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
GdnfP48540 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
GdnfP48540 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
GdnfP48540 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
GdnfP48540 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
GdnfP48540 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
GdnfP48540 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
GdnfP48540 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
GdnfP48540 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
GdnfP48540 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
GdnfP48540 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
GdnfP48540 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
GdnfP48540 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
GdnfP48540 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
GdnfP48540 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
GdnfP48540 Gm12585-201ENSMUST00000117307 290 ntBASIC11.5□□□□□ -0.57
GdnfP48540 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
GdnfP48540 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
GdnfP48540 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
GdnfP48540 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC11.5□□□□□ -0.57
GdnfP48540 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
GdnfP48540 Gm6283-201ENSMUST00000182369 1000 ntBASIC11.5□□□□□ -0.57
GdnfP48540 Ighv1-51-201ENSMUST00000192903 354 ntBASIC11.5□□□□□ -0.57
GdnfP48540 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC11.5□□□□□ -0.57
GdnfP48540 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC11.5□□□□□ -0.57
GdnfP48540 Gm18515-201ENSMUST00000219755 797 ntBASIC11.5□□□□□ -0.57
GdnfP48540 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
GdnfP48540 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
GdnfP48540 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
GdnfP48540 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.5□□□□□ -0.57
GdnfP48540 Gm44401-201ENSMUST00000204462 2375 ntBASIC11.5□□□□□ -0.57
GdnfP48540 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC11.5□□□□□ -0.57
GdnfP48540 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
GdnfP48540 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
GdnfP48540 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
GdnfP48540 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
GdnfP48540 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
GdnfP48540 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
GdnfP48540 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
GdnfP48540 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
GdnfP48540 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
GdnfP48540 AC139350.1-201ENSMUST00000227064 1594 ntBASIC11.5□□□□□ -0.57
GdnfP48540 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
GdnfP48540 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
GdnfP48540 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
GdnfP48540 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
GdnfP48540 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
GdnfP48540 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
GdnfP48540 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
GdnfP48540 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.49□□□□□ -0.57
GdnfP48540 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
GdnfP48540 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
GdnfP48540 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
GdnfP48540 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
GdnfP48540 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC11.49□□□□□ -0.57
GdnfP48540 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC11.49□□□□□ -0.57
GdnfP48540 Gm9522-201ENSMUST00000182394 926 ntBASIC11.49□□□□□ -0.57
GdnfP48540 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC11.49□□□□□ -0.57
GdnfP48540 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
GdnfP48540 Gm10576-201ENSMUST00000191927 825 ntBASIC11.49□□□□□ -0.57
GdnfP48540 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
GdnfP48540 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC11.49□□□□□ -0.57
GdnfP48540 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC11.49□□□□□ -0.57
GdnfP48540 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
GdnfP48540 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
GdnfP48540 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
GdnfP48540 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
GdnfP48540 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
GdnfP48540 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
GdnfP48540 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
GdnfP48540 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
GdnfP48540 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
GdnfP48540 Tmed9-203ENSMUST00000224741 1450 ntBASIC11.49□□□□□ -0.57
GdnfP48540 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
GdnfP48540 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
GdnfP48540 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
GdnfP48540 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
GdnfP48540 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
GdnfP48540 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
GdnfP48540 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
GdnfP48540 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
GdnfP48540 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
GdnfP48540 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
GdnfP48540 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
GdnfP48540 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
GdnfP48540 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
GdnfP48540 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
GdnfP48540 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms