Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-6P43688 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Nkx2-6P43688 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-6P43688 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-6P43688 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-6P43688 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Nkx2-6P43688 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Nkx2-6P43688 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Nkx2-6P43688 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
Nkx2-6P43688 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Nkx2-6P43688 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Nkx2-6P43688 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-6P43688 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Nkx2-6P43688 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-6P43688 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-6P43688 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-6P43688 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Nkx2-6P43688 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-6P43688 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-6P43688 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-6P43688 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-6P43688 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-6P43688 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.39□□□□□ -0.43
Nkx2-6P43688 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-6P43688 Gm11978-201ENSMUST00000122315 466 ntBASIC12.39□□□□□ -0.43
Nkx2-6P43688 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.39□□□□□ -0.43
Nkx2-6P43688 Gm24548-201ENSMUST00000158650 108 ntBASIC12.39□□□□□ -0.43
Nkx2-6P43688 Gm44364-201ENSMUST00000198368 141 ntBASIC12.39□□□□□ -0.43
Nkx2-6P43688 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Nkx2-6P43688 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-6P43688 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-6P43688 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-6P43688 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-6P43688 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Nkx2-6P43688 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-6P43688 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-6P43688 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-6P43688 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
Nkx2-6P43688 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-6P43688 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-6P43688 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-6P43688 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-6P43688 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-6P43688 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-6P43688 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Nkx2-6P43688 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx2-6P43688 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
Nkx2-6P43688 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.38□□□□□ -0.43
Nkx2-6P43688 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx2-6P43688 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx2-6P43688 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx2-6P43688 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Nkx2-6P43688 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx2-6P43688 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx2-6P43688 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx2-6P43688 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx2-6P43688 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.38□□□□□ -0.43
Nkx2-6P43688 Gm8805-201ENSMUST00000117848 313 ntBASIC12.38□□□□□ -0.43
Nkx2-6P43688 Gm12241-201ENSMUST00000118330 726 ntBASIC12.38□□□□□ -0.43
Nkx2-6P43688 Gm16479-201ENSMUST00000121706 932 ntBASIC12.38□□□□□ -0.43
Nkx2-6P43688 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.38□□□□□ -0.43
Nkx2-6P43688 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx2-6P43688 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.38□□□□□ -0.43
Nkx2-6P43688 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.38□□□□□ -0.43
Nkx2-6P43688 Gm27516-201ENSMUST00000184237 98 ntBASIC12.38□□□□□ -0.43
Nkx2-6P43688 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx2-6P43688 Gm28693-202ENSMUST00000190758 331 ntBASIC12.38□□□□□ -0.43
Nkx2-6P43688 Gm43758-201ENSMUST00000199500 367 ntBASIC12.38□□□□□ -0.43
Nkx2-6P43688 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx2-6P43688 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.38□□□□□ -0.43
Nkx2-6P43688 Gm7046-201ENSMUST00000221351 977 ntBASIC12.38□□□□□ -0.43
Nkx2-6P43688 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.38□□□□□ -0.43
Nkx2-6P43688 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Nkx2-6P43688 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Nkx2-6P43688 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx2-6P43688 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx2-6P43688 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.38□□□□□ -0.43
Nkx2-6P43688 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx2-6P43688 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.37□□□□□ -0.43
Nkx2-6P43688 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx2-6P43688 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx2-6P43688 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Nkx2-6P43688 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx2-6P43688 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx2-6P43688 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Nkx2-6P43688 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx2-6P43688 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx2-6P43688 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Nkx2-6P43688 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx2-6P43688 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Nkx2-6P43688 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx2-6P43688 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx2-6P43688 Gm13350-201ENSMUST00000120519 479 ntBASIC12.37□□□□□ -0.43
Nkx2-6P43688 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx2-6P43688 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.37□□□□□ -0.43
Nkx2-6P43688 Gm6222-202ENSMUST00000182143 629 ntBASIC12.37□□□□□ -0.43
Nkx2-6P43688 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx2-6P43688 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.37□□□□□ -0.43
Nkx2-6P43688 Gm8227-201ENSMUST00000223306 571 ntBASIC12.37□□□□□ -0.43
Nkx2-6P43688 Gm19163-201ENSMUST00000223313 780 ntBASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms