Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox18P43680 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Sox18P43680 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC12.65□□□□□ -0.38
Sox18P43680 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Sox18P43680 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox18P43680 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox18P43680 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sox18P43680 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sox18P43680 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC12.65□□□□□ -0.38
Sox18P43680 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.65□□□□□ -0.38
Sox18P43680 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox18P43680 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sox18P43680 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Sox18P43680 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox18P43680 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox18P43680 Gm10434-201ENSMUST00000101158 471 ntBASIC12.65□□□□□ -0.38
Sox18P43680 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Sox18P43680 Gm15770-201ENSMUST00000117498 584 ntBASIC12.65□□□□□ -0.38
Sox18P43680 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sox18P43680 Gm8546-201ENSMUST00000178288 1264 ntBASIC12.65□□□□□ -0.38
Sox18P43680 Gm37835-201ENSMUST00000193305 361 ntBASIC12.65□□□□□ -0.38
Sox18P43680 Gm31256-201ENSMUST00000194705 506 ntBASIC12.65□□□□□ -0.38
Sox18P43680 Gm38317-201ENSMUST00000195564 343 ntBASIC12.65□□□□□ -0.38
Sox18P43680 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sox18P43680 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC12.65□□□□□ -0.38
Sox18P43680 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.65□□□□□ -0.38
Sox18P43680 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.65□□□□□ -0.38
Sox18P43680 Sult1e1-201ENSMUST00000031201 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox18P43680 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC12.65□□□□□ -0.38
Sox18P43680 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox18P43680 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Sox18P43680 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.65□□□□□ -0.38
Sox18P43680 Gm17540-201ENSMUST00000181617 1528 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sox18P43680 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox18P43680 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox18P43680 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Sox18P43680 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox18P43680 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox18P43680 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sox18P43680 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox18P43680 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox18P43680 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox18P43680 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.65□□□□□ -0.38
Sox18P43680 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.65□□□□□ -0.39
Sox18P43680 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sox18P43680 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox18P43680 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox18P43680 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox18P43680 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox18P43680 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Sox18P43680 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Sox18P43680 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sox18P43680 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.64□□□□□ -0.39
Sox18P43680 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC12.64□□□□□ -0.39
Sox18P43680 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sox18P43680 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sox18P43680 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sox18P43680 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sox18P43680 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox18P43680 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox18P43680 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.64□□□□□ -0.39
Sox18P43680 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox18P43680 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox18P43680 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox18P43680 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox18P43680 Gm12403-201ENSMUST00000121384 959 ntBASIC12.64□□□□□ -0.39
Sox18P43680 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.64□□□□□ -0.39
Sox18P43680 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox18P43680 Gm5656-201ENSMUST00000171020 1096 ntBASIC12.64□□□□□ -0.39
Sox18P43680 Gm25732-201ENSMUST00000175168 60 ntBASIC12.64□□□□□ -0.39
Sox18P43680 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.64□□□□□ -0.39
Sox18P43680 C730036E19Rik-201ENSMUST00000188305 1102 ntTSL 5 BASIC12.64□□□□□ -0.39
Sox18P43680 Gm37042-201ENSMUST00000193816 581 ntBASIC12.64□□□□□ -0.39
Sox18P43680 Gm43244-201ENSMUST00000196994 1285 ntBASIC12.64□□□□□ -0.39
Sox18P43680 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC12.64□□□□□ -0.39
Sox18P43680 Gm14267-206ENSMUST00000226870 1209 ntBASIC12.64□□□□□ -0.39
Sox18P43680 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox18P43680 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Sox18P43680 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox18P43680 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC12.64□□□□□ -0.39
Sox18P43680 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Sox18P43680 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Sox18P43680 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox18P43680 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Sox18P43680 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox18P43680 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox18P43680 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox18P43680 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Sox18P43680 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox18P43680 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Sox18P43680 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox18P43680 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox18P43680 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox18P43680 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.64□□□□□ -0.39
Sox18P43680 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox18P43680 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox18P43680 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sox18P43680 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.63□□□□□ -0.39
Sox18P43680 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Sox18P43680 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms