Protein–RNA interactions for Protein: P43277

Hist1h1d, Histone H1.3, mousemouse

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1dP43277 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h1dP43277 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Hist1h1dP43277 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h1dP43277 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h1dP43277 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h1dP43277 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Hist1h1dP43277 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h1dP43277 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h1dP43277 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.1□□□□□ -0.63
Hist1h1dP43277 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Hist1h1dP43277 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h1dP43277 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h1dP43277 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Hist1h1dP43277 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h1dP43277 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h1dP43277 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Hist1h1dP43277 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h1dP43277 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h1dP43277 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h1dP43277 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.09□□□□□ -0.63
Hist1h1dP43277 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.09□□□□□ -0.63
Hist1h1dP43277 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h1dP43277 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h1dP43277 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h1dP43277 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Hist1h1dP43277 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Hist1h1dP43277 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.09□□□□□ -0.63
Hist1h1dP43277 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h1dP43277 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h1dP43277 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h1dP43277 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC11.09□□□□□ -0.63
Hist1h1dP43277 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h1dP43277 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC11.09□□□□□ -0.63
Hist1h1dP43277 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h1dP43277 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Hist1h1dP43277 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC11.09□□□□□ -0.63
Hist1h1dP43277 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h1dP43277 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h1dP43277 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h1dP43277 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC11.09□□□□□ -0.63
Hist1h1dP43277 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h1dP43277 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC11.09□□□□□ -0.63
Hist1h1dP43277 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h1dP43277 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Hist1h1dP43277 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h1dP43277 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Hist1h1dP43277 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.09□□□□□ -0.63
Hist1h1dP43277 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h1dP43277 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h1dP43277 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h1dP43277 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h1dP43277 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h1dP43277 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h1dP43277 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Hist1h1dP43277 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h1dP43277 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h1dP43277 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hist1h1dP43277 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hist1h1dP43277 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hist1h1dP43277 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Hist1h1dP43277 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hist1h1dP43277 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hist1h1dP43277 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hist1h1dP43277 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hist1h1dP43277 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hist1h1dP43277 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hist1h1dP43277 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC11.08□□□□□ -0.64
Hist1h1dP43277 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hist1h1dP43277 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Hist1h1dP43277 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC11.08□□□□□ -0.64
Hist1h1dP43277 Gm9063-201ENSMUST00000223299 582 ntBASIC11.08□□□□□ -0.64
Hist1h1dP43277 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hist1h1dP43277 AC154276.1-201ENSMUST00000228874 1299 ntBASIC11.08□□□□□ -0.64
Hist1h1dP43277 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hist1h1dP43277 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hist1h1dP43277 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Hist1h1dP43277 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hist1h1dP43277 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Hist1h1dP43277 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hist1h1dP43277 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hist1h1dP43277 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hist1h1dP43277 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hist1h1dP43277 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Hist1h1dP43277 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.08□□□□□ -0.64
Hist1h1dP43277 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hist1h1dP43277 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hist1h1dP43277 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hist1h1dP43277 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.08□□□□□ -0.64
Hist1h1dP43277 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hist1h1dP43277 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hist1h1dP43277 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hist1h1dP43277 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hist1h1dP43277 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hist1h1dP43277 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hist1h1dP43277 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hist1h1dP43277 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Hist1h1dP43277 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Hist1h1dP43277 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC11.07□□□□□ -0.64
Hist1h1dP43277 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Hist1h1dP43277 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms