Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Msh2P43247 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Msh2P43247 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Msh2P43247 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Msh2P43247 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Msh2P43247 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Msh2P43247 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Msh2P43247 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Msh2P43247 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Msh2P43247 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Msh2P43247 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Msh2P43247 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Msh2P43247 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Msh2P43247 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Msh2P43247 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Msh2P43247 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Msh2P43247 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Msh2P43247 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Msh2P43247 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Msh2P43247 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Msh2P43247 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Msh2P43247 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Msh2P43247 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.51□□□□□ -0.25
Msh2P43247 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Msh2P43247 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Msh2P43247 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Msh2P43247 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.51□□□□□ -0.25
Msh2P43247 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Msh2P43247 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Msh2P43247 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Msh2P43247 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Msh2P43247 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Msh2P43247 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Msh2P43247 Mir7221-201ENSMUST00000184009 72 ntBASIC13.51□□□□□ -0.25
Msh2P43247 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Msh2P43247 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.51□□□□□ -0.25
Msh2P43247 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.51□□□□□ -0.25
Msh2P43247 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.51□□□□□ -0.25
Msh2P43247 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Msh2P43247 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Msh2P43247 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Msh2P43247 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Msh2P43247 Gm13722-201ENSMUST00000117964 3066 ntBASIC13.51□□□□□ -0.25
Msh2P43247 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Msh2P43247 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Msh2P43247 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Msh2P43247 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Msh2P43247 Gm37105-201ENSMUST00000192251 2085 ntBASIC13.51□□□□□ -0.25
Msh2P43247 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Msh2P43247 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Msh2P43247 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Msh2P43247 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Msh2P43247 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Msh2P43247 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.5□□□□□ -0.25
Msh2P43247 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Msh2P43247 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.5□□□□□ -0.25
Msh2P43247 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Msh2P43247 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Msh2P43247 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.5□□□□□ -0.25
Msh2P43247 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Msh2P43247 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.5□□□□□ -0.25
Msh2P43247 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Msh2P43247 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.5□□□□□ -0.25
Msh2P43247 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Msh2P43247 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Msh2P43247 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.5□□□□□ -0.25
Msh2P43247 Gm27772-201ENSMUST00000184900 187 ntBASIC13.5□□□□□ -0.25
Msh2P43247 Gm28631-201ENSMUST00000190740 334 ntBASIC13.5□□□□□ -0.25
Msh2P43247 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Msh2P43247 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.5□□□□□ -0.25
Msh2P43247 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.5□□□□□ -0.25
Msh2P43247 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Msh2P43247 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.5□□□□□ -0.25
Msh2P43247 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Msh2P43247 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Msh2P43247 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Msh2P43247 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Msh2P43247 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Msh2P43247 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Msh2P43247 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Msh2P43247 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Msh2P43247 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Msh2P43247 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Msh2P43247 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Msh2P43247 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Msh2P43247 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Msh2P43247 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Msh2P43247 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Msh2P43247 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Msh2P43247 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Msh2P43247 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.49□□□□□ -0.25
Msh2P43247 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Msh2P43247 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Msh2P43247 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.49□□□□□ -0.25
Msh2P43247 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Msh2P43247 Adra1a-206ENSMUST00000225182 2337 ntBASIC13.49□□□□□ -0.25
Msh2P43247 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Msh2P43247 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Msh2P43247 Gm5354-201ENSMUST00000182417 973 ntBASIC13.49□□□□□ -0.25
Msh2P43247 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms