Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Nkx2-2P42586 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
Nkx2-2P42586 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Nkx2-2P42586 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-2P42586 Gm12203-201ENSMUST00000118235 598 ntBASIC12□□□□□ -0.49
Nkx2-2P42586 Gm12209-201ENSMUST00000120089 596 ntBASIC12□□□□□ -0.49
Nkx2-2P42586 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12□□□□□ -0.49
Nkx2-2P42586 Gm12539-201ENSMUST00000121549 1098 ntBASIC12□□□□□ -0.49
Nkx2-2P42586 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-2P42586 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12□□□□□ -0.49
Nkx2-2P42586 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12□□□□□ -0.49
Nkx2-2P42586 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-2P42586 Gm9061-201ENSMUST00000182707 1006 ntBASIC12□□□□□ -0.49
Nkx2-2P42586 Gm37497-201ENSMUST00000195830 798 ntBASIC12□□□□□ -0.49
Nkx2-2P42586 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12□□□□□ -0.49
Nkx2-2P42586 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12□□□□□ -0.49
Nkx2-2P42586 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12□□□□□ -0.49
Nkx2-2P42586 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12□□□□□ -0.49
Nkx2-2P42586 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-2P42586 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-2P42586 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-2P42586 Gm13050-201ENSMUST00000122149 1345 ntBASIC12□□□□□ -0.49
Nkx2-2P42586 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12□□□□□ -0.49
Nkx2-2P42586 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Nkx2-2P42586 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-2P42586 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-2P42586 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-2P42586 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12□□□□□ -0.49
Nkx2-2P42586 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Nkx2-2P42586 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-2P42586 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Nkx2-2P42586 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Nkx2-2P42586 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-2P42586 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Nkx2-2P42586 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-2P42586 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12□□□□□ -0.49
Nkx2-2P42586 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-2P42586 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-2P42586 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-2P42586 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-2P42586 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-2P42586 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-2P42586 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-2P42586 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-2P42586 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-2P42586 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx2-2P42586 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx2-2P42586 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx2-2P42586 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx2-2P42586 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx2-2P42586 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Nkx2-2P42586 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Nkx2-2P42586 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx2-2P42586 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC11.99□□□□□ -0.49
Nkx2-2P42586 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx2-2P42586 Gm8805-201ENSMUST00000117848 313 ntBASIC11.99□□□□□ -0.49
Nkx2-2P42586 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx2-2P42586 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.99□□□□□ -0.49
Nkx2-2P42586 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx2-2P42586 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx2-2P42586 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC11.99□□□□□ -0.49
Nkx2-2P42586 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC11.99□□□□□ -0.49
Nkx2-2P42586 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Nkx2-2P42586 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC11.99□□□□□ -0.49
Nkx2-2P42586 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC11.99□□□□□ -0.49
Nkx2-2P42586 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx2-2P42586 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx2-2P42586 Gm2824-203ENSMUST00000226189 1228 ntBASIC11.99□□□□□ -0.49
Nkx2-2P42586 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Nkx2-2P42586 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx2-2P42586 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC11.99□□□□□ -0.49
Nkx2-2P42586 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx2-2P42586 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Nkx2-2P42586 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Nkx2-2P42586 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx2-2P42586 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx2-2P42586 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.99□□□□□ -0.49
Nkx2-2P42586 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC11.99□□□□□ -0.49
Nkx2-2P42586 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx2-2P42586 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx2-2P42586 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Nkx2-2P42586 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx2-2P42586 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx2-2P42586 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx2-2P42586 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx2-2P42586 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx2-2P42586 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx2-2P42586 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC11.98□□□□□ -0.49
Nkx2-2P42586 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-2P42586 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-2P42586 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-2P42586 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-2P42586 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-2P42586 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-2P42586 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-2P42586 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-2P42586 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-2P42586 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-2P42586 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-2P42586 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms