Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TfamP40630 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TfamP40630 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.7□□□□□ -0.38
TfamP40630 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TfamP40630 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TfamP40630 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.7□□□□□ -0.38
TfamP40630 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.7□□□□□ -0.38
TfamP40630 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.7□□□□□ -0.38
TfamP40630 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
TfamP40630 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.7□□□□□ -0.38
TfamP40630 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.7□□□□□ -0.38
TfamP40630 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TfamP40630 Gm19931-201ENSMUST00000198920 368 ntBASIC12.7□□□□□ -0.38
TfamP40630 Wdyhv1-203ENSMUST00000226889 394 ntBASIC12.7□□□□□ -0.38
TfamP40630 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TfamP40630 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TfamP40630 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TfamP40630 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TfamP40630 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TfamP40630 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TfamP40630 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TfamP40630 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TfamP40630 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TfamP40630 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TfamP40630 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.7□□□□□ -0.38
TfamP40630 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TfamP40630 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TfamP40630 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TfamP40630 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
TfamP40630 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TfamP40630 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
TfamP40630 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TfamP40630 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TfamP40630 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
TfamP40630 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TfamP40630 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TfamP40630 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TfamP40630 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
TfamP40630 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
TfamP40630 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TfamP40630 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TfamP40630 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TfamP40630 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TfamP40630 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
TfamP40630 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
TfamP40630 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TfamP40630 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
TfamP40630 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
TfamP40630 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TfamP40630 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TfamP40630 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TfamP40630 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.69□□□□□ -0.38
TfamP40630 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TfamP40630 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
TfamP40630 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
TfamP40630 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TfamP40630 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TfamP40630 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TfamP40630 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TfamP40630 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.69□□□□□ -0.38
TfamP40630 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.69□□□□□ -0.38
TfamP40630 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.69□□□□□ -0.38
TfamP40630 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
TfamP40630 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TfamP40630 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC12.69□□□□□ -0.38
TfamP40630 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TfamP40630 Gm20949-201ENSMUST00000206478 952 ntBASIC12.69□□□□□ -0.38
TfamP40630 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
TfamP40630 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TfamP40630 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TfamP40630 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TfamP40630 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.69□□□□□ -0.38
TfamP40630 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TfamP40630 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
TfamP40630 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TfamP40630 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
TfamP40630 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TfamP40630 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
TfamP40630 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TfamP40630 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TfamP40630 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.68□□□□□ -0.38
TfamP40630 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
TfamP40630 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.68□□□□□ -0.38
TfamP40630 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
TfamP40630 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TfamP40630 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
TfamP40630 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TfamP40630 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TfamP40630 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
TfamP40630 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.68□□□□□ -0.38
TfamP40630 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.68□□□□□ -0.38
TfamP40630 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
TfamP40630 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TfamP40630 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
TfamP40630 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.68□□□□□ -0.38
TfamP40630 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.68□□□□□ -0.38
TfamP40630 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.68□□□□□ -0.38
TfamP40630 Gm16215-201ENSMUST00000161990 637 ntBASIC12.68□□□□□ -0.38
TfamP40630 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.68□□□□□ -0.38
TfamP40630 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms