Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC13.41□□□□□ -0.26
Cxcl12P40224 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cxcl12P40224 Gm9555-201ENSMUST00000200908 583 ntBASIC13.41□□□□□ -0.26
Cxcl12P40224 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cxcl12P40224 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC13.41□□□□□ -0.26
Cxcl12P40224 AC166051.1-201ENSMUST00000214313 210 ntBASIC13.41□□□□□ -0.26
Cxcl12P40224 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cxcl12P40224 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cxcl12P40224 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cxcl12P40224 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Cxcl12P40224 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cxcl12P40224 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cxcl12P40224 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cxcl12P40224 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cxcl12P40224 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cxcl12P40224 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cxcl12P40224 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cxcl12P40224 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cxcl12P40224 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cxcl12P40224 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cxcl12P40224 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.4□□□□□ -0.26
Cxcl12P40224 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cxcl12P40224 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.4□□□□□ -0.26
Cxcl12P40224 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cxcl12P40224 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cxcl12P40224 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cxcl12P40224 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC13.4□□□□□ -0.26
Cxcl12P40224 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC13.4□□□□□ -0.26
Cxcl12P40224 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cxcl12P40224 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Cxcl12P40224 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC13.4□□□□□ -0.26
Cxcl12P40224 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Cxcl12P40224 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cxcl12P40224 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC13.4□□□□□ -0.26
Cxcl12P40224 Gm7207-201ENSMUST00000211575 1067 ntBASIC13.4□□□□□ -0.26
Cxcl12P40224 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cxcl12P40224 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cxcl12P40224 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cxcl12P40224 Gm10179-201ENSMUST00000086233 688 ntBASIC13.4□□□□□ -0.26
Cxcl12P40224 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cxcl12P40224 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Cxcl12P40224 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cxcl12P40224 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cxcl12P40224 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.4□□□□□ -0.26
Cxcl12P40224 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cxcl12P40224 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cxcl12P40224 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Cxcl12P40224 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cxcl12P40224 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cxcl12P40224 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Cxcl12P40224 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cxcl12P40224 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Cxcl12P40224 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Cxcl12P40224 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC13.4□□□□□ -0.26
Cxcl12P40224 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cxcl12P40224 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Cxcl12P40224 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.27
Cxcl12P40224 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Cxcl12P40224 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Cxcl12P40224 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cxcl12P40224 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.39□□□□□ -0.27
Cxcl12P40224 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cxcl12P40224 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cxcl12P40224 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cxcl12P40224 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cxcl12P40224 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cxcl12P40224 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Cxcl12P40224 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cxcl12P40224 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cxcl12P40224 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cxcl12P40224 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cxcl12P40224 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Cxcl12P40224 Gm16397-201ENSMUST00000122201 494 ntBASIC13.39□□□□□ -0.27
Cxcl12P40224 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC13.39□□□□□ -0.27
Cxcl12P40224 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC13.39□□□□□ -0.27
Cxcl12P40224 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC13.39□□□□□ -0.27
Cxcl12P40224 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC13.39□□□□□ -0.27
Cxcl12P40224 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Cxcl12P40224 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Cxcl12P40224 Gm42918-201ENSMUST00000199249 1580 ntBASIC13.39□□□□□ -0.27
Cxcl12P40224 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cxcl12P40224 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cxcl12P40224 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cxcl12P40224 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cxcl12P40224 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.39□□□□□ -0.27
Cxcl12P40224 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cxcl12P40224 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Cxcl12P40224 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cxcl12P40224 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cxcl12P40224 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Cxcl12P40224 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cxcl12P40224 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cxcl12P40224 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cxcl12P40224 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cxcl12P40224 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.39□□□□□ -0.27
Cxcl12P40224 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cxcl12P40224 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cxcl12P40224 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.38□□□□□ -0.27
Cxcl12P40224 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cxcl12P40224 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms