Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rfc1P35601 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC13.82□□□□□ -0.2
Rfc1P35601 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rfc1P35601 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rfc1P35601 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rfc1P35601 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rfc1P35601 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rfc1P35601 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rfc1P35601 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Rfc1P35601 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rfc1P35601 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rfc1P35601 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Rfc1P35601 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC13.81□□□□□ -0.2
Rfc1P35601 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Rfc1P35601 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rfc1P35601 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.81□□□□□ -0.2
Rfc1P35601 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rfc1P35601 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rfc1P35601 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rfc1P35601 Gm5566-201ENSMUST00000116118 459 ntBASIC13.81□□□□□ -0.2
Rfc1P35601 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rfc1P35601 Gm24158-201ENSMUST00000175263 71 ntBASIC13.81□□□□□ -0.2
Rfc1P35601 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
Rfc1P35601 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Rfc1P35601 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rfc1P35601 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rfc1P35601 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rfc1P35601 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rfc1P35601 Map1b-203ENSMUST00000223725 2669 ntBASIC13.81□□□□□ -0.2
Rfc1P35601 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Rfc1P35601 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Rfc1P35601 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC13.81□□□□□ -0.2
Rfc1P35601 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rfc1P35601 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Rfc1P35601 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rfc1P35601 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC13.8□□□□□ -0.2
Rfc1P35601 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfc1P35601 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfc1P35601 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfc1P35601 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.8□□□□□ -0.2
Rfc1P35601 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfc1P35601 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rfc1P35601 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfc1P35601 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.8□□□□□ -0.2
Rfc1P35601 Gm44292-201ENSMUST00000205194 2364 ntBASIC13.8□□□□□ -0.2
Rfc1P35601 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.8□□□□□ -0.2
Rfc1P35601 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfc1P35601 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfc1P35601 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC13.8□□□□□ -0.2
Rfc1P35601 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfc1P35601 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfc1P35601 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rfc1P35601 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rfc1P35601 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfc1P35601 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Rfc1P35601 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfc1P35601 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.8□□□□□ -0.2
Rfc1P35601 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfc1P35601 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rfc1P35601 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfc1P35601 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfc1P35601 Gm9719-201ENSMUST00000162765 543 ntBASIC13.8□□□□□ -0.2
Rfc1P35601 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC13.8□□□□□ -0.2
Rfc1P35601 Gm6736-201ENSMUST00000166583 948 ntBASIC13.8□□□□□ -0.2
Rfc1P35601 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.8□□□□□ -0.2
Rfc1P35601 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.8□□□□□ -0.2
Rfc1P35601 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfc1P35601 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfc1P35601 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Rfc1P35601 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfc1P35601 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfc1P35601 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Rfc1P35601 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfc1P35601 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfc1P35601 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rfc1P35601 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rfc1P35601 Gm37513-201ENSMUST00000194830 2268 ntBASIC13.8□□□□□ -0.2
Rfc1P35601 Gm38378-201ENSMUST00000195153 2268 ntBASIC13.8□□□□□ -0.2
Rfc1P35601 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Rfc1P35601 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC13.8□□□□□ -0.2
Rfc1P35601 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfc1P35601 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfc1P35601 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfc1P35601 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfc1P35601 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfc1P35601 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfc1P35601 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rfc1P35601 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rfc1P35601 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rfc1P35601 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rfc1P35601 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rfc1P35601 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rfc1P35601 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rfc1P35601 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rfc1P35601 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rfc1P35601 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rfc1P35601 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rfc1P35601 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rfc1P35601 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rfc1P35601 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms