Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.12□□□□□ -0.47
Foxa1P35582 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.12□□□□□ -0.47
Foxa1P35582 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Foxa1P35582 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Foxa1P35582 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Foxa1P35582 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Foxa1P35582 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Foxa1P35582 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Foxa1P35582 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Foxa1P35582 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Foxa1P35582 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.12□□□□□ -0.47
Foxa1P35582 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Foxa1P35582 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Foxa1P35582 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Foxa1P35582 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Foxa1P35582 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Foxa1P35582 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Foxa1P35582 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Foxa1P35582 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Foxa1P35582 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.11□□□□□ -0.47
Foxa1P35582 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Foxa1P35582 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Foxa1P35582 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Foxa1P35582 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Foxa1P35582 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Foxa1P35582 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Foxa1P35582 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Foxa1P35582 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Foxa1P35582 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Foxa1P35582 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Foxa1P35582 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Foxa1P35582 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Foxa1P35582 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Foxa1P35582 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.11□□□□□ -0.47
Foxa1P35582 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Foxa1P35582 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.11□□□□□ -0.47
Foxa1P35582 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Foxa1P35582 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.11□□□□□ -0.47
Foxa1P35582 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.11□□□□□ -0.47
Foxa1P35582 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.11□□□□□ -0.47
Foxa1P35582 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.11□□□□□ -0.47
Foxa1P35582 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.11□□□□□ -0.47
Foxa1P35582 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Foxa1P35582 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Foxa1P35582 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Foxa1P35582 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Foxa1P35582 Gm6091-201ENSMUST00000098307 165 ntBASIC12.11□□□□□ -0.47
Foxa1P35582 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Foxa1P35582 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Foxa1P35582 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Foxa1P35582 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Foxa1P35582 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Foxa1P35582 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.11□□□□□ -0.47
Foxa1P35582 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Foxa1P35582 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.11□□□□□ -0.47
Foxa1P35582 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Foxa1P35582 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Foxa1P35582 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.11□□□□□ -0.47
Foxa1P35582 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Foxa1P35582 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Foxa1P35582 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Foxa1P35582 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Foxa1P35582 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.11□□□□□ -0.47
Foxa1P35582 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Foxa1P35582 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Foxa1P35582 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Foxa1P35582 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Foxa1P35582 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.1□□□□□ -0.47
Foxa1P35582 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Foxa1P35582 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Foxa1P35582 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Foxa1P35582 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Foxa1P35582 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Foxa1P35582 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Foxa1P35582 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Foxa1P35582 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Foxa1P35582 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Foxa1P35582 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Foxa1P35582 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Foxa1P35582 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.1□□□□□ -0.47
Foxa1P35582 Gm13369-201ENSMUST00000119442 987 ntBASIC12.1□□□□□ -0.47
Foxa1P35582 Gm13123-201ENSMUST00000122173 492 ntBASIC12.1□□□□□ -0.47
Foxa1P35582 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Foxa1P35582 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.1□□□□□ -0.47
Foxa1P35582 Gm22331-201ENSMUST00000158066 136 ntBASIC12.1□□□□□ -0.47
Foxa1P35582 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.1□□□□□ -0.47
Foxa1P35582 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.1□□□□□ -0.47
Foxa1P35582 Gm37922-201ENSMUST00000195596 455 ntBASIC12.1□□□□□ -0.47
Foxa1P35582 Gm7561-201ENSMUST00000211203 886 ntBASIC12.1□□□□□ -0.47
Foxa1P35582 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Foxa1P35582 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.1□□□□□ -0.47
Foxa1P35582 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Foxa1P35582 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Foxa1P35582 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.1□□□□□ -0.47
Foxa1P35582 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Foxa1P35582 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Foxa1P35582 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Foxa1P35582 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Foxa1P35582 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Foxa1P35582 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms