Protein–RNA interactions for Protein: P32043

Hoxc5, Homeobox protein Hox-C5, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc5P32043 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.17□□□□□ -0.46
Hoxc5P32043 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc5P32043 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc5P32043 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.17□□□□□ -0.46
Hoxc5P32043 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.17□□□□□ -0.46
Hoxc5P32043 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Hoxc5P32043 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc5P32043 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Hoxc5P32043 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc5P32043 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc5P32043 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc5P32043 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc5P32043 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc5P32043 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.16□□□□□ -0.46
Hoxc5P32043 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc5P32043 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc5P32043 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc5P32043 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc5P32043 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc5P32043 Mir874-201ENSMUST00000104769 76 ntBASIC12.16□□□□□ -0.46
Hoxc5P32043 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.16□□□□□ -0.46
Hoxc5P32043 Gm13689-201ENSMUST00000119360 685 ntBASIC12.16□□□□□ -0.46
Hoxc5P32043 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc5P32043 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.16□□□□□ -0.46
Hoxc5P32043 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC12.16□□□□□ -0.46
Hoxc5P32043 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Hoxc5P32043 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC12.16□□□□□ -0.46
Hoxc5P32043 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.16□□□□□ -0.46
Hoxc5P32043 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.16□□□□□ -0.46
Hoxc5P32043 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC12.16□□□□□ -0.46
Hoxc5P32043 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.16□□□□□ -0.46
Hoxc5P32043 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc5P32043 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.16□□□□□ -0.46
Hoxc5P32043 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.16□□□□□ -0.46
Hoxc5P32043 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.16□□□□□ -0.46
Hoxc5P32043 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc5P32043 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc5P32043 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC12.16□□□□□ -0.46
Hoxc5P32043 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc5P32043 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc5P32043 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.16□□□□□ -0.46
Hoxc5P32043 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Hoxc5P32043 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc5P32043 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.16□□□□□ -0.46
Hoxc5P32043 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.16□□□□□ -0.46
Hoxc5P32043 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc5P32043 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc5P32043 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc5P32043 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc5P32043 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc5P32043 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc5P32043 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc5P32043 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc5P32043 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.16□□□□□ -0.46
Hoxc5P32043 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc5P32043 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc5P32043 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc5P32043 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.15□□□□□ -0.46
Hoxc5P32043 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxc5P32043 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
Hoxc5P32043 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxc5P32043 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxc5P32043 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxc5P32043 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Hoxc5P32043 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxc5P32043 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Hoxc5P32043 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxc5P32043 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxc5P32043 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxc5P32043 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Hoxc5P32043 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Hoxc5P32043 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxc5P32043 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxc5P32043 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.15□□□□□ -0.46
Hoxc5P32043 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxc5P32043 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxc5P32043 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxc5P32043 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxc5P32043 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxc5P32043 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.15□□□□□ -0.46
Hoxc5P32043 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.15□□□□□ -0.46
Hoxc5P32043 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxc5P32043 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxc5P32043 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.15□□□□□ -0.46
Hoxc5P32043 Gm38144-201ENSMUST00000192790 465 ntBASIC12.15□□□□□ -0.46
Hoxc5P32043 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Hoxc5P32043 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC12.15□□□□□ -0.46
Hoxc5P32043 Gm42550-201ENSMUST00000201553 960 ntBASIC12.15□□□□□ -0.46
Hoxc5P32043 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.15□□□□□ -0.46
Hoxc5P32043 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.15□□□□□ -0.46
Hoxc5P32043 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.15□□□□□ -0.46
Hoxc5P32043 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxc5P32043 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxc5P32043 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Hoxc5P32043 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.15□□□□□ -0.46
Hoxc5P32043 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxc5P32043 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxc5P32043 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxc5P32043 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxc5P32043 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms