Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RxrbP28704 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RxrbP28704 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RxrbP28704 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.16□□□□□ -0.3
RxrbP28704 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.16□□□□□ -0.3
RxrbP28704 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RxrbP28704 Gm1995-201ENSMUST00000220838 2602 ntBASIC13.16□□□□□ -0.3
RxrbP28704 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RxrbP28704 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RxrbP28704 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RxrbP28704 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
RxrbP28704 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RxrbP28704 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RxrbP28704 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
RxrbP28704 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RxrbP28704 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RxrbP28704 Gm23935-201ENSMUST00000102303 57 ntBASIC13.16□□□□□ -0.3
RxrbP28704 Gm24270-201ENSMUST00000102326 57 ntBASIC13.16□□□□□ -0.3
RxrbP28704 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RxrbP28704 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.16□□□□□ -0.3
RxrbP28704 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.16□□□□□ -0.3
RxrbP28704 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.16□□□□□ -0.3
RxrbP28704 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.16□□□□□ -0.3
RxrbP28704 Gm12403-201ENSMUST00000121384 959 ntBASIC13.16□□□□□ -0.3
RxrbP28704 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.16□□□□□ -0.3
RxrbP28704 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC13.16□□□□□ -0.3
RxrbP28704 Gm24245-201ENSMUST00000157318 57 ntBASIC13.16□□□□□ -0.3
RxrbP28704 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.16□□□□□ -0.3
RxrbP28704 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.16□□□□□ -0.3
RxrbP28704 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RxrbP28704 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.16□□□□□ -0.3
RxrbP28704 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.16□□□□□ -0.3
RxrbP28704 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
RxrbP28704 Gm37171-201ENSMUST00000192636 1185 ntBASIC13.16□□□□□ -0.3
RxrbP28704 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
RxrbP28704 Gm43575-201ENSMUST00000196420 516 ntBASIC13.16□□□□□ -0.3
RxrbP28704 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RxrbP28704 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RxrbP28704 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
RxrbP28704 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RxrbP28704 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RxrbP28704 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
RxrbP28704 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.16□□□□□ -0.3
RxrbP28704 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC13.16□□□□□ -0.3
RxrbP28704 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RxrbP28704 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
RxrbP28704 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RxrbP28704 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RxrbP28704 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RxrbP28704 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RxrbP28704 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RxrbP28704 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.15□□□□□ -0.3
RxrbP28704 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.15□□□□□ -0.3
RxrbP28704 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.15□□□□□ -0.3
RxrbP28704 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RxrbP28704 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
RxrbP28704 Gm5053-201ENSMUST00000208361 1678 ntBASIC13.15□□□□□ -0.3
RxrbP28704 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC13.15□□□□□ -0.3
RxrbP28704 Arhgef3-204ENSMUST00000225949 3198 ntBASIC13.15□□□□□ -0.3
RxrbP28704 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RxrbP28704 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.15□□□□□ -0.3
RxrbP28704 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.15□□□□□ -0.3
RxrbP28704 Gm13453-201ENSMUST00000118708 357 ntBASIC13.15□□□□□ -0.3
RxrbP28704 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.15□□□□□ -0.3
RxrbP28704 Gm22175-201ENSMUST00000175007 78 ntBASIC13.15□□□□□ -0.3
RxrbP28704 Gm27772-201ENSMUST00000184900 187 ntBASIC13.15□□□□□ -0.3
RxrbP28704 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.15□□□□□ -0.3
RxrbP28704 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
RxrbP28704 AC169036.1-201ENSMUST00000227994 296 ntBASIC13.15□□□□□ -0.3
RxrbP28704 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
RxrbP28704 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RxrbP28704 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
RxrbP28704 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RxrbP28704 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
RxrbP28704 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
RxrbP28704 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
RxrbP28704 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RxrbP28704 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RxrbP28704 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
RxrbP28704 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
RxrbP28704 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
RxrbP28704 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
RxrbP28704 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
RxrbP28704 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
RxrbP28704 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
RxrbP28704 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
RxrbP28704 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.14□□□□□ -0.31
RxrbP28704 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RxrbP28704 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RxrbP28704 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RxrbP28704 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RxrbP28704 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
RxrbP28704 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RxrbP28704 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RxrbP28704 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RxrbP28704 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.14□□□□□ -0.31
RxrbP28704 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RxrbP28704 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RxrbP28704 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
RxrbP28704 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms