Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfrsf1bP25119 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Tnfrsf1bP25119 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfrsf1bP25119 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.14□□□□□ -0.47
Tnfrsf1bP25119 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.14□□□□□ -0.47
Tnfrsf1bP25119 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Tnfrsf1bP25119 Gm6266-201ENSMUST00000203844 806 ntBASIC12.14□□□□□ -0.47
Tnfrsf1bP25119 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.14□□□□□ -0.47
Tnfrsf1bP25119 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Tnfrsf1bP25119 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.14□□□□□ -0.47
Tnfrsf1bP25119 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfrsf1bP25119 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfrsf1bP25119 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfrsf1bP25119 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfrsf1bP25119 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfrsf1bP25119 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfrsf1bP25119 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfrsf1bP25119 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Tnfrsf1bP25119 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfrsf1bP25119 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.14□□□□□ -0.47
Tnfrsf1bP25119 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfrsf1bP25119 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfrsf1bP25119 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfrsf1bP25119 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfrsf1bP25119 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfrsf1bP25119 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfrsf1bP25119 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.14□□□□□ -0.47
Tnfrsf1bP25119 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Tnfrsf1bP25119 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.14□□□□□ -0.47
Tnfrsf1bP25119 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Tnfrsf1bP25119 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfrsf1bP25119 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfrsf1bP25119 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfrsf1bP25119 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfrsf1bP25119 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Tnfrsf1bP25119 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfrsf1bP25119 Gm27331-201ENSMUST00000183705 60 ntBASIC12.13□□□□□ -0.47
Tnfrsf1bP25119 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.13□□□□□ -0.47
Tnfrsf1bP25119 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.13□□□□□ -0.47
Tnfrsf1bP25119 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.13□□□□□ -0.47
Tnfrsf1bP25119 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.13□□□□□ -0.47
Tnfrsf1bP25119 Gm29705-201ENSMUST00000212598 474 ntBASIC12.13□□□□□ -0.47
Tnfrsf1bP25119 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC12.13□□□□□ -0.47
Tnfrsf1bP25119 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.13□□□□□ -0.47
Tnfrsf1bP25119 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.13□□□□□ -0.47
Tnfrsf1bP25119 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfrsf1bP25119 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfrsf1bP25119 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfrsf1bP25119 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.13□□□□□ -0.47
Tnfrsf1bP25119 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfrsf1bP25119 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.13□□□□□ -0.47
Tnfrsf1bP25119 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfrsf1bP25119 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfrsf1bP25119 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.13□□□□□ -0.47
Tnfrsf1bP25119 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.13□□□□□ -0.47
Tnfrsf1bP25119 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfrsf1bP25119 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfrsf1bP25119 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfrsf1bP25119 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.13□□□□□ -0.47
Tnfrsf1bP25119 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfrsf1bP25119 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfrsf1bP25119 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfrsf1bP25119 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.13□□□□□ -0.47
Tnfrsf1bP25119 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.13□□□□□ -0.47
Tnfrsf1bP25119 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfrsf1bP25119 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfrsf1bP25119 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfrsf1bP25119 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfrsf1bP25119 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Tnfrsf1bP25119 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfrsf1bP25119 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.12□□□□□ -0.47
Tnfrsf1bP25119 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.12□□□□□ -0.47
Tnfrsf1bP25119 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfrsf1bP25119 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfrsf1bP25119 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfrsf1bP25119 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfrsf1bP25119 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfrsf1bP25119 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfrsf1bP25119 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfrsf1bP25119 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Tnfrsf1bP25119 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfrsf1bP25119 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.12□□□□□ -0.47
Tnfrsf1bP25119 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfrsf1bP25119 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfrsf1bP25119 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfrsf1bP25119 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfrsf1bP25119 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfrsf1bP25119 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfrsf1bP25119 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfrsf1bP25119 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfrsf1bP25119 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfrsf1bP25119 Gm6754-201ENSMUST00000117124 913 ntBASIC12.12□□□□□ -0.47
Tnfrsf1bP25119 Gm8805-201ENSMUST00000117848 313 ntBASIC12.12□□□□□ -0.47
Tnfrsf1bP25119 Gm13829-201ENSMUST00000119600 138 ntBASIC12.12□□□□□ -0.47
Tnfrsf1bP25119 Gm13123-201ENSMUST00000122173 492 ntBASIC12.12□□□□□ -0.47
Tnfrsf1bP25119 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.12□□□□□ -0.47
Tnfrsf1bP25119 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.12□□□□□ -0.47
Tnfrsf1bP25119 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.12□□□□□ -0.47
Tnfrsf1bP25119 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfrsf1bP25119 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms