Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.57□□□□□ -0.4
Cntn1P12960 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cntn1P12960 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cntn1P12960 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cntn1P12960 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cntn1P12960 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.57□□□□□ -0.4
Cntn1P12960 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Cntn1P12960 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cntn1P12960 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.57□□□□□ -0.4
Cntn1P12960 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cntn1P12960 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cntn1P12960 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.57□□□□□ -0.4
Cntn1P12960 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.57□□□□□ -0.4
Cntn1P12960 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cntn1P12960 Mir686-201ENSMUST00000102174 109 ntBASIC12.57□□□□□ -0.4
Cntn1P12960 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Cntn1P12960 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.57□□□□□ -0.4
Cntn1P12960 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cntn1P12960 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.57□□□□□ -0.4
Cntn1P12960 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cntn1P12960 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Cntn1P12960 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cntn1P12960 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.57□□□□□ -0.4
Cntn1P12960 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.57□□□□□ -0.4
Cntn1P12960 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
Cntn1P12960 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Cntn1P12960 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cntn1P12960 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Cntn1P12960 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cntn1P12960 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cntn1P12960 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.57□□□□□ -0.4
Cntn1P12960 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.57□□□□□ -0.4
Cntn1P12960 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cntn1P12960 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cntn1P12960 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cntn1P12960 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cntn1P12960 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cntn1P12960 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Cntn1P12960 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Cntn1P12960 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.56□□□□□ -0.4
Cntn1P12960 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cntn1P12960 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Cntn1P12960 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.56□□□□□ -0.4
Cntn1P12960 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cntn1P12960 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cntn1P12960 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cntn1P12960 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Cntn1P12960 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cntn1P12960 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cntn1P12960 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Cntn1P12960 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cntn1P12960 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cntn1P12960 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cntn1P12960 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cntn1P12960 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.56□□□□□ -0.4
Cntn1P12960 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Cntn1P12960 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cntn1P12960 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.56□□□□□ -0.4
Cntn1P12960 Gm42693-201ENSMUST00000196779 631 ntBASIC12.56□□□□□ -0.4
Cntn1P12960 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Cntn1P12960 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cntn1P12960 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Cntn1P12960 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cntn1P12960 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cntn1P12960 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cntn1P12960 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cntn1P12960 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cntn1P12960 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Cntn1P12960 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cntn1P12960 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cntn1P12960 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Cntn1P12960 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cntn1P12960 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cntn1P12960 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cntn1P12960 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.56□□□□□ -0.4
Cntn1P12960 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cntn1P12960 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.55□□□□□ -0.4
Cntn1P12960 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cntn1P12960 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cntn1P12960 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.55□□□□□ -0.4
Cntn1P12960 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cntn1P12960 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cntn1P12960 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cntn1P12960 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cntn1P12960 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cntn1P12960 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Cntn1P12960 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cntn1P12960 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cntn1P12960 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cntn1P12960 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cntn1P12960 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cntn1P12960 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cntn1P12960 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cntn1P12960 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.55□□□□□ -0.4
Cntn1P12960 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.55□□□□□ -0.4
Cntn1P12960 Gm16479-201ENSMUST00000121706 932 ntBASIC12.55□□□□□ -0.4
Cntn1P12960 Gm2231-201ENSMUST00000125661 612 ntBASIC12.55□□□□□ -0.4
Cntn1P12960 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.55□□□□□ -0.4
Cntn1P12960 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cntn1P12960 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms