Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fv4P11370 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Fv4P11370 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fv4P11370 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Fv4P11370 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Fv4P11370 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.66□□□□□ -0.38
Fv4P11370 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fv4P11370 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fv4P11370 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Fv4P11370 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Fv4P11370 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.66□□□□□ -0.38
Fv4P11370 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Fv4P11370 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fv4P11370 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fv4P11370 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.66□□□□□ -0.38
Fv4P11370 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Fv4P11370 Gm11978-201ENSMUST00000122315 466 ntBASIC12.66□□□□□ -0.38
Fv4P11370 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Fv4P11370 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Fv4P11370 Gm44397-201ENSMUST00000195950 113 ntBASIC12.66□□□□□ -0.38
Fv4P11370 Gm18307-201ENSMUST00000206864 949 ntBASIC12.66□□□□□ -0.38
Fv4P11370 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.66□□□□□ -0.38
Fv4P11370 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fv4P11370 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fv4P11370 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fv4P11370 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fv4P11370 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fv4P11370 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.66□□□□□ -0.38
Fv4P11370 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fv4P11370 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Fv4P11370 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fv4P11370 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fv4P11370 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fv4P11370 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fv4P11370 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Fv4P11370 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Fv4P11370 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.65□□□□□ -0.38
Fv4P11370 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Fv4P11370 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Fv4P11370 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Fv4P11370 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Fv4P11370 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Fv4P11370 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.65□□□□□ -0.38
Fv4P11370 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Fv4P11370 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Fv4P11370 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Fv4P11370 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.65□□□□□ -0.38
Fv4P11370 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC12.65□□□□□ -0.38
Fv4P11370 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.65□□□□□ -0.38
Fv4P11370 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.65□□□□□ -0.38
Fv4P11370 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Fv4P11370 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.65□□□□□ -0.38
Fv4P11370 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.65□□□□□ -0.38
Fv4P11370 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.65□□□□□ -0.38
Fv4P11370 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Fv4P11370 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Fv4P11370 Gm44855-201ENSMUST00000205725 362 ntBASIC12.65□□□□□ -0.38
Fv4P11370 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Fv4P11370 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Fv4P11370 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC12.65□□□□□ -0.38
Fv4P11370 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Fv4P11370 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Fv4P11370 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Fv4P11370 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Fv4P11370 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Fv4P11370 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Fv4P11370 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Fv4P11370 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Fv4P11370 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Fv4P11370 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Fv4P11370 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Fv4P11370 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Fv4P11370 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Fv4P11370 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Fv4P11370 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Fv4P11370 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
Fv4P11370 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Fv4P11370 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fv4P11370 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fv4P11370 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fv4P11370 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Fv4P11370 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fv4P11370 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.64□□□□□ -0.39
Fv4P11370 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Fv4P11370 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fv4P11370 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fv4P11370 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fv4P11370 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fv4P11370 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Fv4P11370 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fv4P11370 Gm5687-201ENSMUST00000118252 640 ntBASIC12.64□□□□□ -0.39
Fv4P11370 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.64□□□□□ -0.39
Fv4P11370 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Fv4P11370 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Fv4P11370 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.64□□□□□ -0.39
Fv4P11370 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Fv4P11370 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Fv4P11370 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.64□□□□□ -0.39
Fv4P11370 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Fv4P11370 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms