Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Lire1P11260 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lire1P11260 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.49□□□□□ -0.41
Lire1P11260 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lire1P11260 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lire1P11260 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.49□□□□□ -0.41
Lire1P11260 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lire1P11260 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lire1P11260 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lire1P11260 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lire1P11260 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lire1P11260 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Lire1P11260 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.49□□□□□ -0.41
Lire1P11260 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Lire1P11260 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.49□□□□□ -0.41
Lire1P11260 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lire1P11260 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lire1P11260 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lire1P11260 Gm8602-201ENSMUST00000184045 607 ntBASIC12.49□□□□□ -0.41
Lire1P11260 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lire1P11260 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.49□□□□□ -0.41
Lire1P11260 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC12.49□□□□□ -0.41
Lire1P11260 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.49□□□□□ -0.41
Lire1P11260 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lire1P11260 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lire1P11260 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lire1P11260 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lire1P11260 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lire1P11260 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lire1P11260 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lire1P11260 Gm37411-201ENSMUST00000194180 2282 ntBASIC12.49□□□□□ -0.41
Lire1P11260 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lire1P11260 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lire1P11260 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lire1P11260 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lire1P11260 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Lire1P11260 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lire1P11260 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Lire1P11260 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.48□□□□□ -0.41
Lire1P11260 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lire1P11260 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lire1P11260 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lire1P11260 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lire1P11260 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lire1P11260 Gm5763-201ENSMUST00000155951 1530 ntBASIC12.48□□□□□ -0.41
Lire1P11260 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lire1P11260 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lire1P11260 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lire1P11260 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lire1P11260 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.48□□□□□ -0.41
Lire1P11260 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lire1P11260 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lire1P11260 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Lire1P11260 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lire1P11260 Gm15393-201ENSMUST00000120499 219 ntBASIC12.48□□□□□ -0.41
Lire1P11260 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Lire1P11260 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.48□□□□□ -0.41
Lire1P11260 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.48□□□□□ -0.41
Lire1P11260 Gm5354-201ENSMUST00000182417 973 ntBASIC12.48□□□□□ -0.41
Lire1P11260 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.48□□□□□ -0.41
Lire1P11260 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.48□□□□□ -0.41
Lire1P11260 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.48□□□□□ -0.41
Lire1P11260 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.48□□□□□ -0.41
Lire1P11260 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lire1P11260 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lire1P11260 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.48□□□□□ -0.41
Lire1P11260 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lire1P11260 Gm5124-202ENSMUST00000132683 2083 ntBASIC12.48□□□□□ -0.41
Lire1P11260 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lire1P11260 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lire1P11260 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lire1P11260 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Lire1P11260 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lire1P11260 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lire1P11260 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lire1P11260 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lire1P11260 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lire1P11260 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Lire1P11260 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Lire1P11260 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lire1P11260 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lire1P11260 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lire1P11260 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lire1P11260 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.47□□□□□ -0.41
Lire1P11260 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lire1P11260 BC001981-202ENSMUST00000191393 1545 ntBASIC12.47□□□□□ -0.41
Lire1P11260 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lire1P11260 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lire1P11260 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Lire1P11260 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lire1P11260 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lire1P11260 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lire1P11260 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lire1P11260 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lire1P11260 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lire1P11260 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lire1P11260 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC12.47□□□□□ -0.41
Lire1P11260 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lire1P11260 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lire1P11260 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms