Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC14.28□□□□□ -0.12
Chmp6P0C0A3 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Chmp6P0C0A3 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp6P0C0A3 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp6P0C0A3 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC14.28□□□□□ -0.12
Chmp6P0C0A3 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp6P0C0A3 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp6P0C0A3 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp6P0C0A3 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp6P0C0A3 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC14.28□□□□□ -0.12
Chmp6P0C0A3 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Chmp6P0C0A3 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp6P0C0A3 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chmp6P0C0A3 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chmp6P0C0A3 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chmp6P0C0A3 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chmp6P0C0A3 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC14.27□□□□□ -0.12
Chmp6P0C0A3 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chmp6P0C0A3 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chmp6P0C0A3 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chmp6P0C0A3 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Chmp6P0C0A3 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Chmp6P0C0A3 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
Chmp6P0C0A3 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Chmp6P0C0A3 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chmp6P0C0A3 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Chmp6P0C0A3 Gm45638-201ENSMUST00000211507 2878 ntBASIC14.27□□□□□ -0.12
Chmp6P0C0A3 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chmp6P0C0A3 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chmp6P0C0A3 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Chmp6P0C0A3 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Chmp6P0C0A3 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Chmp6P0C0A3 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC14.27□□□□□ -0.13
Chmp6P0C0A3 Gm8463-201ENSMUST00000208573 613 ntBASIC14.27□□□□□ -0.13
Chmp6P0C0A3 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Chmp6P0C0A3 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Chmp6P0C0A3 Gm42748-201ENSMUST00000199354 2341 ntBASIC14.27□□□□□ -0.13
Chmp6P0C0A3 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Chmp6P0C0A3 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Chmp6P0C0A3 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Chmp6P0C0A3 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Chmp6P0C0A3 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Chmp6P0C0A3 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Chmp6P0C0A3 Gm10040-201ENSMUST00000080726 1662 ntBASIC14.26□□□□□ -0.13
Chmp6P0C0A3 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp6P0C0A3 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp6P0C0A3 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp6P0C0A3 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp6P0C0A3 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp6P0C0A3 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp6P0C0A3 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Chmp6P0C0A3 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp6P0C0A3 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp6P0C0A3 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC14.26□□□□□ -0.13
Chmp6P0C0A3 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp6P0C0A3 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp6P0C0A3 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp6P0C0A3 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp6P0C0A3 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC14.26□□□□□ -0.13
Chmp6P0C0A3 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp6P0C0A3 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp6P0C0A3 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC14.26□□□□□ -0.13
Chmp6P0C0A3 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC14.26□□□□□ -0.13
Chmp6P0C0A3 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Chmp6P0C0A3 Gm8602-201ENSMUST00000184045 607 ntBASIC14.26□□□□□ -0.13
Chmp6P0C0A3 Gm27839-201ENSMUST00000184242 106 ntBASIC14.26□□□□□ -0.13
Chmp6P0C0A3 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp6P0C0A3 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Chmp6P0C0A3 AC132467.2-202ENSMUST00000227726 559 ntBASIC14.26□□□□□ -0.13
Chmp6P0C0A3 Itm2b-204ENSMUST00000228637 783 ntBASIC14.26□□□□□ -0.13
Chmp6P0C0A3 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp6P0C0A3 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp6P0C0A3 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp6P0C0A3 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp6P0C0A3 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp6P0C0A3 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC14.26□□□□□ -0.13
Chmp6P0C0A3 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.26□□□□□ -0.13
Chmp6P0C0A3 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Chmp6P0C0A3 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Chmp6P0C0A3 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp6P0C0A3 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp6P0C0A3 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp6P0C0A3 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp6P0C0A3 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp6P0C0A3 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp6P0C0A3 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Chmp6P0C0A3 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp6P0C0A3 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC14.26□□□□□ -0.13
Chmp6P0C0A3 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp6P0C0A3 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Chmp6P0C0A3 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Chmp6P0C0A3 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp6P0C0A3 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp6P0C0A3 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Chmp6P0C0A3 Gm4782-201ENSMUST00000168705 2046 ntBASIC14.25□□□□□ -0.13
Chmp6P0C0A3 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp6P0C0A3 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp6P0C0A3 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Chmp6P0C0A3 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp6P0C0A3 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms