Protein–RNA interactions for Protein: P0C090

Rc3h2, Roquin-2, mousemouse

Known RBP Predictions only

Length 1,187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h2P0C090 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rc3h2P0C090 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Rc3h2P0C090 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rc3h2P0C090 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rc3h2P0C090 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rc3h2P0C090 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rc3h2P0C090 AC101945.2-201ENSMUST00000227886 1377 ntBASIC13.34□□□□□ -0.27
Rc3h2P0C090 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rc3h2P0C090 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rc3h2P0C090 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rc3h2P0C090 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rc3h2P0C090 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rc3h2P0C090 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rc3h2P0C090 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.34□□□□□ -0.27
Rc3h2P0C090 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Rc3h2P0C090 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rc3h2P0C090 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rc3h2P0C090 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.34□□□□□ -0.27
Rc3h2P0C090 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rc3h2P0C090 Gm13342-201ENSMUST00000121055 207 ntBASIC13.34□□□□□ -0.27
Rc3h2P0C090 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC13.34□□□□□ -0.27
Rc3h2P0C090 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC13.34□□□□□ -0.27
Rc3h2P0C090 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC13.34□□□□□ -0.27
Rc3h2P0C090 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC13.34□□□□□ -0.27
Rc3h2P0C090 Gm7783-201ENSMUST00000204795 781 ntBASIC13.34□□□□□ -0.27
Rc3h2P0C090 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.34□□□□□ -0.27
Rc3h2P0C090 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rc3h2P0C090 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rc3h2P0C090 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rc3h2P0C090 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rc3h2P0C090 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rc3h2P0C090 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rc3h2P0C090 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.34□□□□□ -0.27
Rc3h2P0C090 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.34□□□□□ -0.27
Rc3h2P0C090 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Rc3h2P0C090 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rc3h2P0C090 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rc3h2P0C090 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rc3h2P0C090 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.34□□□□□ -0.27
Rc3h2P0C090 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Rc3h2P0C090 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rc3h2P0C090 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rc3h2P0C090 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rc3h2P0C090 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Rc3h2P0C090 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rc3h2P0C090 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.33□□□□□ -0.27
Rc3h2P0C090 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rc3h2P0C090 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rc3h2P0C090 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rc3h2P0C090 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Rc3h2P0C090 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rc3h2P0C090 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rc3h2P0C090 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
Rc3h2P0C090 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rc3h2P0C090 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.33□□□□□ -0.28
Rc3h2P0C090 Gm12241-201ENSMUST00000118330 726 ntBASIC13.33□□□□□ -0.28
Rc3h2P0C090 Gm11658-201ENSMUST00000120913 1008 ntBASIC13.33□□□□□ -0.28
Rc3h2P0C090 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rc3h2P0C090 Gm17208-201ENSMUST00000168388 535 ntBASIC13.33□□□□□ -0.28
Rc3h2P0C090 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rc3h2P0C090 Gm2467-201ENSMUST00000182266 1010 ntBASIC13.33□□□□□ -0.28
Rc3h2P0C090 Gm3890-201ENSMUST00000182416 207 ntBASIC13.33□□□□□ -0.28
Rc3h2P0C090 Gm6981-201ENSMUST00000182467 1008 ntBASIC13.33□□□□□ -0.28
Rc3h2P0C090 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rc3h2P0C090 Gm44364-201ENSMUST00000198368 141 ntBASIC13.33□□□□□ -0.28
Rc3h2P0C090 Gm18584-201ENSMUST00000203098 964 ntBASIC13.33□□□□□ -0.28
Rc3h2P0C090 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rc3h2P0C090 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC13.33□□□□□ -0.28
Rc3h2P0C090 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rc3h2P0C090 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rc3h2P0C090 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rc3h2P0C090 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rc3h2P0C090 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Rc3h2P0C090 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rc3h2P0C090 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rc3h2P0C090 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.33□□□□□ -0.28
Rc3h2P0C090 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rc3h2P0C090 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rc3h2P0C090 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rc3h2P0C090 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rc3h2P0C090 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rc3h2P0C090 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rc3h2P0C090 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rc3h2P0C090 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Rc3h2P0C090 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rc3h2P0C090 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rc3h2P0C090 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Rc3h2P0C090 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Rc3h2P0C090 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rc3h2P0C090 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rc3h2P0C090 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rc3h2P0C090 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rc3h2P0C090 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rc3h2P0C090 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rc3h2P0C090 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rc3h2P0C090 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rc3h2P0C090 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rc3h2P0C090 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rc3h2P0C090 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rc3h2P0C090 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms