Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC19.42■□□□□ 0.7
NclP09405 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
NclP09405 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NclP09405 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NclP09405 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC19.41■□□□□ 0.7
NclP09405 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NclP09405 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NclP09405 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NclP09405 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NclP09405 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NclP09405 Gm17208-201ENSMUST00000168388 535 ntBASIC19.41■□□□□ 0.7
NclP09405 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NclP09405 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NclP09405 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NclP09405 Gm6203-201ENSMUST00000209575 1342 ntBASIC19.41■□□□□ 0.7
NclP09405 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC19.41■□□□□ 0.7
NclP09405 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
NclP09405 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
NclP09405 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
NclP09405 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NclP09405 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NclP09405 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NclP09405 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
NclP09405 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NclP09405 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NclP09405 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
NclP09405 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NclP09405 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
NclP09405 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NclP09405 AC154262.2-201ENSMUST00000224310 2293 ntBASIC19.4■□□□□ 0.7
NclP09405 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC19.4■□□□□ 0.7
NclP09405 Gm45546-201ENSMUST00000211053 2394 ntBASIC19.4■□□□□ 0.7
NclP09405 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NclP09405 Gm6023-201ENSMUST00000118217 606 ntBASIC19.4■□□□□ 0.7
NclP09405 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NclP09405 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC19.4■□□□□ 0.7
NclP09405 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NclP09405 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC19.4■□□□□ 0.7
NclP09405 Gm29396-201ENSMUST00000185659 716 ntBASIC19.4■□□□□ 0.7
NclP09405 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC19.4■□□□□ 0.7
NclP09405 Gm9368-201ENSMUST00000219348 831 ntBASIC19.4■□□□□ 0.7
NclP09405 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NclP09405 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC19.4■□□□□ 0.7
NclP09405 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NclP09405 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NclP09405 Grk6-205ENSMUST00000224653 2976 ntBASIC19.4■□□□□ 0.7
NclP09405 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
NclP09405 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NclP09405 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NclP09405 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NclP09405 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
NclP09405 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NclP09405 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.7
NclP09405 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
NclP09405 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
NclP09405 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
NclP09405 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
NclP09405 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
NclP09405 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
NclP09405 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
NclP09405 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
NclP09405 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NclP09405 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NclP09405 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NclP09405 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NclP09405 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NclP09405 Gm9431-201ENSMUST00000119765 1051 ntBASIC19.39■□□□□ 0.69
NclP09405 Gm13786-201ENSMUST00000122371 333 ntBASIC19.39■□□□□ 0.69
NclP09405 Gm3890-201ENSMUST00000182416 207 ntBASIC19.39■□□□□ 0.69
NclP09405 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC19.39■□□□□ 0.69
NclP09405 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC19.39■□□□□ 0.69
NclP09405 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
NclP09405 Gm37691-201ENSMUST00000192147 2573 ntBASIC19.39■□□□□ 0.69
NclP09405 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NclP09405 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NclP09405 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NclP09405 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NclP09405 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NclP09405 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
NclP09405 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NclP09405 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NclP09405 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
NclP09405 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
NclP09405 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
NclP09405 Gm12241-201ENSMUST00000118330 726 ntBASIC19.38■□□□□ 0.69
NclP09405 Gm11658-201ENSMUST00000120913 1008 ntBASIC19.38■□□□□ 0.69
NclP09405 Gm13342-201ENSMUST00000121055 207 ntBASIC19.38■□□□□ 0.69
NclP09405 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC19.38■□□□□ 0.69
NclP09405 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NclP09405 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NclP09405 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC19.38■□□□□ 0.69
NclP09405 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NclP09405 Gm2467-201ENSMUST00000182266 1010 ntBASIC19.38■□□□□ 0.69
NclP09405 Gm6981-201ENSMUST00000182467 1008 ntBASIC19.38■□□□□ 0.69
NclP09405 Mir7221-201ENSMUST00000184009 72 ntBASIC19.38■□□□□ 0.69
NclP09405 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NclP09405 Gm38297-201ENSMUST00000195122 1057 ntBASIC19.38■□□□□ 0.69
NclP09405 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NclP09405 Gm18584-201ENSMUST00000203098 964 ntBASIC19.38■□□□□ 0.69
NclP09405 Gm10608-202ENSMUST00000213924 676 ntBASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms