Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxa3P02831 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxa3P02831 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxa3P02831 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC11.01□□□□□ -0.65
Hoxa3P02831 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxa3P02831 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Hoxa3P02831 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hoxa3P02831 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hoxa3P02831 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Hoxa3P02831 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hoxa3P02831 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hoxa3P02831 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Hoxa3P02831 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
Hoxa3P02831 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC11□□□□□ -0.65
Hoxa3P02831 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC11□□□□□ -0.65
Hoxa3P02831 Dctn4-202ENSMUST00000223590 1530 ntBASIC11□□□□□ -0.65
Hoxa3P02831 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hoxa3P02831 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hoxa3P02831 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Hoxa3P02831 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC11□□□□□ -0.65
Hoxa3P02831 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Hoxa3P02831 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC11□□□□□ -0.65
Hoxa3P02831 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Hoxa3P02831 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11□□□□□ -0.65
Hoxa3P02831 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC11□□□□□ -0.65
Hoxa3P02831 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC11□□□□□ -0.65
Hoxa3P02831 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC11□□□□□ -0.65
Hoxa3P02831 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hoxa3P02831 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hoxa3P02831 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC11□□□□□ -0.65
Hoxa3P02831 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hoxa3P02831 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hoxa3P02831 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hoxa3P02831 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Hoxa3P02831 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hoxa3P02831 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Hoxa3P02831 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC11□□□□□ -0.65
Hoxa3P02831 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hoxa3P02831 Gm7553-201ENSMUST00000185805 1426 ntBASIC11□□□□□ -0.65
Hoxa3P02831 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC11□□□□□ -0.65
Hoxa3P02831 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC10.99□□□□□ -0.65
Hoxa3P02831 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hoxa3P02831 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
Hoxa3P02831 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hoxa3P02831 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hoxa3P02831 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
Hoxa3P02831 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hoxa3P02831 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hoxa3P02831 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Hoxa3P02831 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Hoxa3P02831 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hoxa3P02831 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hoxa3P02831 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hoxa3P02831 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hoxa3P02831 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hoxa3P02831 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Hoxa3P02831 Gm12384-201ENSMUST00000119228 919 ntBASIC10.99□□□□□ -0.65
Hoxa3P02831 Gm8565-201ENSMUST00000183259 1014 ntBASIC10.99□□□□□ -0.65
Hoxa3P02831 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC10.99□□□□□ -0.65
Hoxa3P02831 Gm9728-201ENSMUST00000200197 1055 ntBASIC10.99□□□□□ -0.65
Hoxa3P02831 Gm43818-201ENSMUST00000200605 466 ntBASIC10.99□□□□□ -0.65
Hoxa3P02831 Gm6007-201ENSMUST00000208170 823 ntBASIC10.99□□□□□ -0.65
Hoxa3P02831 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC10.99□□□□□ -0.65
Hoxa3P02831 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC10.99□□□□□ -0.65
Hoxa3P02831 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hoxa3P02831 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Hoxa3P02831 Gm37861-201ENSMUST00000193534 2869 ntBASIC10.99□□□□□ -0.65
Hoxa3P02831 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC10.99□□□□□ -0.65
Hoxa3P02831 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC10.99□□□□□ -0.65
Hoxa3P02831 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Hoxa3P02831 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hoxa3P02831 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hoxa3P02831 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Hoxa3P02831 AC139350.1-201ENSMUST00000227064 1594 ntBASIC10.99□□□□□ -0.65
Hoxa3P02831 Gm42748-201ENSMUST00000199354 2341 ntBASIC10.98□□□□□ -0.65
Hoxa3P02831 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Hoxa3P02831 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hoxa3P02831 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hoxa3P02831 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hoxa3P02831 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Hoxa3P02831 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hoxa3P02831 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Hoxa3P02831 Gm7899-201ENSMUST00000192935 1897 ntBASIC10.98□□□□□ -0.65
Hoxa3P02831 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hoxa3P02831 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC10.98□□□□□ -0.65
Hoxa3P02831 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Hoxa3P02831 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hoxa3P02831 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC10.98□□□□□ -0.65
Hoxa3P02831 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC10.98□□□□□ -0.65
Hoxa3P02831 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Hoxa3P02831 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hoxa3P02831 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Hoxa3P02831 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hoxa3P02831 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC10.98□□□□□ -0.65
Hoxa3P02831 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Hoxa3P02831 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC10.98□□□□□ -0.65
Hoxa3P02831 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC10.98□□□□□ -0.65
Hoxa3P02831 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC10.98□□□□□ -0.65
Hoxa3P02831 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hoxa3P02831 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms