Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Col4a1P02463 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col4a1P02463 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col4a1P02463 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Col4a1P02463 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Col4a1P02463 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col4a1P02463 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col4a1P02463 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col4a1P02463 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col4a1P02463 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col4a1P02463 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col4a1P02463 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
Col4a1P02463 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC15.77■□□□□ 0.12
Col4a1P02463 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Col4a1P02463 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Col4a1P02463 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Col4a1P02463 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Col4a1P02463 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Col4a1P02463 Gm15515-201ENSMUST00000117827 822 ntBASIC15.77■□□□□ 0.12
Col4a1P02463 Gm5863-201ENSMUST00000121760 1008 ntBASIC15.77■□□□□ 0.12
Col4a1P02463 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Col4a1P02463 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC15.77■□□□□ 0.12
Col4a1P02463 Gm32999-201ENSMUST00000192693 562 ntBASIC15.77■□□□□ 0.12
Col4a1P02463 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Col4a1P02463 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Col4a1P02463 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
Col4a1P02463 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Col4a1P02463 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Col4a1P02463 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Col4a1P02463 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Col4a1P02463 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Col4a1P02463 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Col4a1P02463 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Col4a1P02463 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Col4a1P02463 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Col4a1P02463 Gm18626-201ENSMUST00000221512 1409 ntBASIC15.77■□□□□ 0.11
Col4a1P02463 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC15.77■□□□□ 0.11
Col4a1P02463 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Col4a1P02463 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Col4a1P02463 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col4a1P02463 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC15.76■□□□□ 0.11
Col4a1P02463 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col4a1P02463 Gm19187-201ENSMUST00000206781 892 ntBASIC15.76■□□□□ 0.11
Col4a1P02463 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Col4a1P02463 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Col4a1P02463 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
Col4a1P02463 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col4a1P02463 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Col4a1P02463 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC15.76■□□□□ 0.11
Col4a1P02463 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col4a1P02463 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Col4a1P02463 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col4a1P02463 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col4a1P02463 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col4a1P02463 Gm5939-201ENSMUST00000119613 2874 ntBASIC15.76■□□□□ 0.11
Col4a1P02463 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC15.76■□□□□ 0.11
Col4a1P02463 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col4a1P02463 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col4a1P02463 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Col4a1P02463 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
Col4a1P02463 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC15.76■□□□□ 0.11
Col4a1P02463 Gm8285-201ENSMUST00000208293 759 ntBASIC15.76■□□□□ 0.11
Col4a1P02463 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC15.76■□□□□ 0.11
Col4a1P02463 Gm6781-201ENSMUST00000038304 1242 ntBASIC15.76■□□□□ 0.11
Col4a1P02463 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC15.76■□□□□ 0.11
Col4a1P02463 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col4a1P02463 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col4a1P02463 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col4a1P02463 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col4a1P02463 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col4a1P02463 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Col4a1P02463 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Col4a1P02463 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col4a1P02463 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
Col4a1P02463 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col4a1P02463 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC15.75■□□□□ 0.11
Col4a1P02463 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col4a1P02463 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Col4a1P02463 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC15.75■□□□□ 0.11
Col4a1P02463 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col4a1P02463 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC15.75■□□□□ 0.11
Col4a1P02463 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC15.75■□□□□ 0.11
Col4a1P02463 Gm12286-201ENSMUST00000119246 1002 ntBASIC15.75■□□□□ 0.11
Col4a1P02463 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC15.75■□□□□ 0.11
Col4a1P02463 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Col4a1P02463 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col4a1P02463 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col4a1P02463 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col4a1P02463 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Col4a1P02463 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Col4a1P02463 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
Col4a1P02463 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col4a1P02463 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Col4a1P02463 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC15.74■□□□□ 0.11
Col4a1P02463 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Col4a1P02463 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col4a1P02463 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Col4a1P02463 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col4a1P02463 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Col4a1P02463 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms