Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vti1aO89116 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vti1aO89116 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Vti1aO89116 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vti1aO89116 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Vti1aO89116 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vti1aO89116 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vti1aO89116 Gm22018-201ENSMUST00000104357 131 ntBASIC14.13□□□□□ -0.15
Vti1aO89116 Gm11618-201ENSMUST00000117946 267 ntBASIC14.13□□□□□ -0.15
Vti1aO89116 Gm12329-201ENSMUST00000120829 1007 ntBASIC14.13□□□□□ -0.15
Vti1aO89116 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC14.13□□□□□ -0.15
Vti1aO89116 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC14.13□□□□□ -0.15
Vti1aO89116 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC14.13□□□□□ -0.15
Vti1aO89116 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC14.13□□□□□ -0.15
Vti1aO89116 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vti1aO89116 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vti1aO89116 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vti1aO89116 AC133598.1-201ENSMUST00000224327 660 ntBASIC14.13□□□□□ -0.15
Vti1aO89116 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vti1aO89116 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vti1aO89116 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vti1aO89116 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vti1aO89116 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vti1aO89116 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC14.13□□□□□ -0.15
Vti1aO89116 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vti1aO89116 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Vti1aO89116 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vti1aO89116 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vti1aO89116 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vti1aO89116 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vti1aO89116 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vti1aO89116 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vti1aO89116 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC14.13□□□□□ -0.15
Vti1aO89116 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.13□□□□□ -0.15
Vti1aO89116 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vti1aO89116 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vti1aO89116 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vti1aO89116 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC14.12□□□□□ -0.15
Vti1aO89116 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vti1aO89116 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vti1aO89116 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vti1aO89116 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vti1aO89116 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vti1aO89116 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vti1aO89116 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vti1aO89116 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vti1aO89116 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vti1aO89116 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC14.12□□□□□ -0.15
Vti1aO89116 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vti1aO89116 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vti1aO89116 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vti1aO89116 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vti1aO89116 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC14.12□□□□□ -0.15
Vti1aO89116 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Vti1aO89116 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC14.12□□□□□ -0.15
Vti1aO89116 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC14.12□□□□□ -0.15
Vti1aO89116 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Vti1aO89116 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Vti1aO89116 Gm18935-201ENSMUST00000212692 664 ntBASIC14.12□□□□□ -0.15
Vti1aO89116 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vti1aO89116 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vti1aO89116 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vti1aO89116 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Vti1aO89116 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Vti1aO89116 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Vti1aO89116 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC14.12□□□□□ -0.15
Vti1aO89116 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vti1aO89116 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vti1aO89116 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vti1aO89116 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vti1aO89116 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vti1aO89116 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Vti1aO89116 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Vti1aO89116 Gm5620-201ENSMUST00000077991 1348 ntBASIC14.12□□□□□ -0.15
Vti1aO89116 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Vti1aO89116 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vti1aO89116 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vti1aO89116 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vti1aO89116 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vti1aO89116 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vti1aO89116 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vti1aO89116 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vti1aO89116 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Vti1aO89116 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Vti1aO89116 Gm37324-201ENSMUST00000194500 4504 ntBASIC14.11□□□□□ -0.15
Vti1aO89116 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC14.11□□□□□ -0.15
Vti1aO89116 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vti1aO89116 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vti1aO89116 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vti1aO89116 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC14.11□□□□□ -0.15
Vti1aO89116 Gm4782-201ENSMUST00000168705 2046 ntBASIC14.11□□□□□ -0.15
Vti1aO89116 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vti1aO89116 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC14.11□□□□□ -0.15
Vti1aO89116 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vti1aO89116 Gm44065-201ENSMUST00000203184 3527 ntBASIC14.11□□□□□ -0.15
Vti1aO89116 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC14.11□□□□□ -0.15
Vti1aO89116 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC14.11□□□□□ -0.15
Vti1aO89116 Gm45930-201ENSMUST00000221330 292 ntBASIC14.11□□□□□ -0.15
Vti1aO89116 AC134254.1-201ENSMUST00000221362 167 ntBASIC14.11□□□□□ -0.15
Vti1aO89116 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms