Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ClppO88696 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ClppO88696 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
ClppO88696 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.85□□□□□ -0.35
ClppO88696 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
ClppO88696 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.85□□□□□ -0.35
ClppO88696 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ClppO88696 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ClppO88696 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
ClppO88696 Gm6157-201ENSMUST00000199935 1897 ntBASIC12.85□□□□□ -0.35
ClppO88696 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ClppO88696 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ClppO88696 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ClppO88696 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
ClppO88696 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ClppO88696 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
ClppO88696 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ClppO88696 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
ClppO88696 Gm12957-201ENSMUST00000117835 377 ntBASIC12.85□□□□□ -0.35
ClppO88696 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
ClppO88696 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ClppO88696 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ClppO88696 Gm27731-201ENSMUST00000185192 107 ntBASIC12.85□□□□□ -0.35
ClppO88696 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ClppO88696 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.85□□□□□ -0.35
ClppO88696 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.85□□□□□ -0.35
ClppO88696 Itm2b-204ENSMUST00000228637 783 ntBASIC12.85□□□□□ -0.35
ClppO88696 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ClppO88696 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
ClppO88696 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ClppO88696 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ClppO88696 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ClppO88696 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
ClppO88696 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
ClppO88696 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
ClppO88696 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ClppO88696 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ClppO88696 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
ClppO88696 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ClppO88696 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ClppO88696 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC12.85□□□□□ -0.35
ClppO88696 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ClppO88696 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
ClppO88696 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ClppO88696 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
ClppO88696 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ClppO88696 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ClppO88696 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
ClppO88696 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC12.85□□□□□ -0.35
ClppO88696 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
ClppO88696 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.85□□□□□ -0.35
ClppO88696 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
ClppO88696 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ClppO88696 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ClppO88696 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ClppO88696 Gm5859-201ENSMUST00000165401 2324 ntBASIC12.84□□□□□ -0.35
ClppO88696 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
ClppO88696 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
ClppO88696 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
ClppO88696 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ClppO88696 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ClppO88696 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ClppO88696 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ClppO88696 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
ClppO88696 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ClppO88696 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ClppO88696 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ClppO88696 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ClppO88696 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ClppO88696 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.84□□□□□ -0.35
ClppO88696 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ClppO88696 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.84□□□□□ -0.35
ClppO88696 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
ClppO88696 Gm43818-201ENSMUST00000200605 466 ntBASIC12.84□□□□□ -0.35
ClppO88696 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
ClppO88696 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.84□□□□□ -0.35
ClppO88696 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ClppO88696 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ClppO88696 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ClppO88696 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ClppO88696 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
ClppO88696 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ClppO88696 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ClppO88696 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ClppO88696 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ClppO88696 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ClppO88696 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.84□□□□□ -0.35
ClppO88696 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ClppO88696 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ClppO88696 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
ClppO88696 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
ClppO88696 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
ClppO88696 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ClppO88696 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
ClppO88696 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
ClppO88696 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC12.83□□□□□ -0.35
ClppO88696 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
ClppO88696 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ClppO88696 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
ClppO88696 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms