Protein–RNA interactions for Protein: O88322

Nid2, Nidogen-2, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid2O88322 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nid2O88322 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC16.81■□□□□ 0.28
Nid2O88322 Gm15515-201ENSMUST00000117827 822 ntBASIC16.81■□□□□ 0.28
Nid2O88322 Gm11667-201ENSMUST00000119828 486 ntBASIC16.81■□□□□ 0.28
Nid2O88322 Gm11450-201ENSMUST00000121144 333 ntBASIC16.81■□□□□ 0.28
Nid2O88322 Gm8494-201ENSMUST00000178171 1233 ntBASIC16.81■□□□□ 0.28
Nid2O88322 Gm29615-201ENSMUST00000185371 697 ntBASIC16.81■□□□□ 0.28
Nid2O88322 Gm28224-201ENSMUST00000186078 697 ntBASIC16.81■□□□□ 0.28
Nid2O88322 Gm29001-201ENSMUST00000186177 697 ntBASIC16.81■□□□□ 0.28
Nid2O88322 Gm28292-201ENSMUST00000186593 697 ntBASIC16.81■□□□□ 0.28
Nid2O88322 Gm28101-201ENSMUST00000187608 697 ntBASIC16.81■□□□□ 0.28
Nid2O88322 Gm29076-201ENSMUST00000187689 697 ntBASIC16.81■□□□□ 0.28
Nid2O88322 Gm28302-201ENSMUST00000187931 697 ntBASIC16.81■□□□□ 0.28
Nid2O88322 Gm28646-201ENSMUST00000188220 697 ntBASIC16.81■□□□□ 0.28
Nid2O88322 Gm28205-201ENSMUST00000189177 697 ntBASIC16.81■□□□□ 0.28
Nid2O88322 Gm29032-201ENSMUST00000189797 697 ntBASIC16.81■□□□□ 0.28
Nid2O88322 Gm28695-201ENSMUST00000190300 697 ntBASIC16.81■□□□□ 0.28
Nid2O88322 Gm37448-201ENSMUST00000192795 697 ntBASIC16.81■□□□□ 0.28
Nid2O88322 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC16.81■□□□□ 0.28
Nid2O88322 AC159819.2-201ENSMUST00000216151 342 ntBASIC16.81■□□□□ 0.28
Nid2O88322 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC16.81■□□□□ 0.28
Nid2O88322 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nid2O88322 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC16.81■□□□□ 0.28
Nid2O88322 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nid2O88322 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC16.81■□□□□ 0.28
Nid2O88322 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nid2O88322 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nid2O88322 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nid2O88322 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nid2O88322 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nid2O88322 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nid2O88322 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nid2O88322 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Nid2O88322 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nid2O88322 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Nid2O88322 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nid2O88322 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nid2O88322 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nid2O88322 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nid2O88322 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nid2O88322 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC16.8■□□□□ 0.28
Nid2O88322 Gm11405-201ENSMUST00000118689 1556 ntBASIC16.8■□□□□ 0.28
Nid2O88322 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nid2O88322 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nid2O88322 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nid2O88322 Gm12314-201ENSMUST00000118104 538 ntBASIC16.8■□□□□ 0.28
Nid2O88322 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nid2O88322 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nid2O88322 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nid2O88322 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nid2O88322 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
Nid2O88322 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nid2O88322 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nid2O88322 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Nid2O88322 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
Nid2O88322 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nid2O88322 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nid2O88322 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC16.8■□□□□ 0.28
Nid2O88322 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nid2O88322 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
Nid2O88322 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nid2O88322 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nid2O88322 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nid2O88322 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nid2O88322 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nid2O88322 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Nid2O88322 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nid2O88322 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Nid2O88322 Gm15131-201ENSMUST00000119124 595 ntBASIC16.79■□□□□ 0.28
Nid2O88322 Gm13813-201ENSMUST00000120998 787 ntBASIC16.79■□□□□ 0.28
Nid2O88322 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC16.79■□□□□ 0.28
Nid2O88322 Gm10051-201ENSMUST00000145209 414 ntBASIC16.79■□□□□ 0.28
Nid2O88322 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Nid2O88322 Gm27627-201ENSMUST00000183644 150 ntBASIC16.79■□□□□ 0.28
Nid2O88322 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
Nid2O88322 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nid2O88322 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Nid2O88322 Ap5m1-205ENSMUST00000227431 3757 ntBASIC16.79■□□□□ 0.28
Nid2O88322 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Nid2O88322 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nid2O88322 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Nid2O88322 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nid2O88322 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC16.79■□□□□ 0.28
Nid2O88322 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Nid2O88322 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nid2O88322 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nid2O88322 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
Nid2O88322 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nid2O88322 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
Nid2O88322 Gm23949-201ENSMUST00000104027 127 ntBASIC16.79■□□□□ 0.28
Nid2O88322 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
Nid2O88322 Gm6039-201ENSMUST00000121667 1250 ntBASIC16.79■□□□□ 0.28
Nid2O88322 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC16.79■□□□□ 0.28
Nid2O88322 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC16.79■□□□□ 0.28
Nid2O88322 Gm19459-201ENSMUST00000176240 835 ntBASIC16.79■□□□□ 0.28
Nid2O88322 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC16.79■□□□□ 0.28
Nid2O88322 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nid2O88322 Gm21027-201ENSMUST00000219300 1236 ntBASIC16.79■□□□□ 0.28
Nid2O88322 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nid2O88322 Gm10179-201ENSMUST00000086233 688 ntBASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms